| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_03 | THIS_month:psum | 4.7 | 2.4 | 11.4 | 5.4 | 10.3 | 15.1 | 41.3 | 4.2 | 22.7 | 26.6 | 178.5 |
| fr | 2001_03 | 1e4u:A | 4.5 | 3.3 | 1.256620e+01 | 5.538072e+00 | 4.1e+01 | 4.7e+01 | 5.1e+01 | 2e-05 | 4.6e+01 | 5.0e+01 | 78 |
| fr | 2001_03 | 1f75:B | 1.2 | 1.6 | -1.246310e+01 | -2.748746e+00 | 4.7e-01 | 9.4e-01 | 2.3e+01 | 0.33 | 5.7e+00 | 8.0e+00 | 212 |
| fr | 2001_03 | 1fi4:A | 23.4 | 4.7 | -1.400607e-01 | 1.003609e+01 | 3.0e+01 | 3.8e+01 | 7.2e+01 | 9e-31 | 5.2e+01 | 6.0e+01 | 382 |
| fr | 2001_03 | 1fsh:A | 0.6 | 0.7 | -1.053060e+01 | -5.358841e+00 | 0.0e+00 | 4.3e+00 | 6.2e+01 | 4.0 | 1.8e+01 | 2.8e+01 | 94 |
| fr | 2001_03 | 1fw9:A | 2.0 | 0 | -2.908571e+01 | -3.627928e+00 | 3.0e+00 | 5.5e+00 | 1.3e+01 | 3.4 | 0.0e+00 | 0.0e+00 | 164 |
| fr | 2001_03 | 1g12:A | 0.4 | 1.2 | -1.386452e+01 | -3.370737e+00 | 2.4e+00 | 3.6e+00 | 2.6e+01 | 3.1 | 8.4e+00 | 1.1e+01 | 167 |
| fr | 2001_03 | 1g2h:A | 2.5 | 2.0 | -1.605445e+01 | -1.001311e+01 | 4.9e+00 | 2.5e+01 | 6.2e+01 | 0.88 | 3.1e+01 | 3.4e+01 | 61 |
| fr | 2001_03 | 1g8e:B | 1.7 | 1.6 | -2.180666e+01 | -6.089002e+00 | 0.0e+00 | 3.8e+00 | 3.5e+01 | 13 | 2.9e+01 | 3.1e+01 | 80 |
| fr | 2001_03 | 1g9l:A | 0.6 | 2.0 | -2.181423e+01 | -4.208870e+00 | 1.4e+00 | 4.9e+00 | 1.9e+01 | 1.4 | 7.6e+00 | 1.2e+01 | 144 |
| fr | 2001_03 | 1gef:E | 1.3 | 2.0 | -3.214737e+01 | -5.357895e+00 | 1.4e+01 | 1.5e+01 | 1.7e+01 | 1.8 | 1.5e+01 | 1.5e+01 | 114 |
| fr | 2001_03 | 1gh5:A | 0.8 | 1.6 | -8.097191e+00 | -5.966871e+00 | 3.4e+00 | 1.1e+01 | 7.5e+01 | 1.7 | 2.5e+01 | 3.6e+01 | 87 |
| fr | 2001_03 | 1hhn:A | 1.3 | 2.0 | -1.970323e+01 | -5.689269e+00 | 2.0e+00 | 9.9e+00 | 3.1e+01 | 7.4 | 1.9e+01 | 2.4e+01 | 101 |
| fr | 2001_03 | 1hn5:A | 15.3 | 5.2 | -3.530636e+00 | 9.500741e+00 | 2.1e+01 | 3.5e+01 | 7.8e+01 | 2e-08 | 5.3e+01 | 5.9e+01 | 222 |
| fr | 2001_03 | 1hn5:B | 14.9 | 4.1 | -3.841509e+00 | 1.155740e+01 | 2.2e+01 | 2.7e+01 | 7.2e+01 | 6e-17 | 5.1e+01 | 5.5e+01 | 222 |
| fr | 2001_03 | 1hn5:C | 14.5 | 4.6 | -3.038806e+00 | 6.272441e+00 | 1.9e+01 | 2.7e+01 | 8.1e+01 | 1e-13 | 5.1e+01 | 5.6e+01 | 248 |
| fr | 2001_03 | 1hn5:D | 4.1 | 3.1 | -2.036000e+01 | 2.248660e+00 | 1.0e+01 | 1.1e+01 | 1.2e+01 | 1.3 | 1.2e+01 | 1.2e+01 | 250 |
| fr | 2001_03 | 1hn5:E | 2.3 | 2.6 | -6.232653e+00 | 1.896590e+00 | 4.4e-01 | 8.8e-01 | 4.3e+01 | 2.9 | 1.5e+01 | 1.8e+01 | 228 |
| fr | 2001_03 | 1hn5:F | 0.1 | 0.7 | -1.272500e+01 | -1.781174e+00 | 1.8e+00 | 3.5e+00 | 2.1e+01 | 0.80 | 5.3e+00 | 9.7e+00 | 227 |
| fr | 2001_03 | 1ho4:A | 0.5 | 2.0 | -2.433673e+01 | -1.238218e+00 | 5.4e+00 | 7.9e+00 | 1.0e+01 | 2.3 | 6.2e+00 | 6.6e+00 | 242 |
| fr | 2001_03 | 1hs7:A | 1.4 | 1.6 | -1.713566e+00 | 1.535922e+00 | 0.0e+00 | 2.1e+00 | 6.0e+01 | 0.31 | 1.4e+01 | 1.6e+01 | 97 |
| fr | 2001_03 | 1hux:A | 11.8 | 4.7 | 8.358694e+00 | 6.918490e+00 | 2.7e+01 | 3.0e+01 | 3.2e+01 | 3e-16 | 2.7e+01 | 3.0e+01 | 259 |
| fr | 2001_03 | 1hx1:B | 3.6 | 3.7 | -1.357333e+01 | 1.338479e-01 | 8.9e-01 | 4.5e+00 | 4.0e+01 | 2.4 | 2.7e+01 | 2.9e+01 | 112 |
| fr | 2001_03 | 1i17:A | 6.6 | 3.3 | 1.352979e+01 | 4.767189e+00 | 3.6e+01 | 3.9e+01 | 4.1e+01 | 0.07 | 3.2e+01 | 3.6e+01 | 107 |
| fr | 2001_03 | 1i27:A | 1.9 | 0.7 | -1.696667e+01 | -8.357974e+00 | 1.1e+01 | 1.8e+01 | 4.9e+01 | 0.70 | 1.4e+01 | 2.5e+01 | 73 |
| fr | 2001_03 | 1i2j:A | 2.3 | 2.6 | -8.686701e+00 | -9.317824e-01 | 2.4e+00 | 4.3e+00 | 9.1e+00 | 58 | 4.1e+00 | 4.3e+00 | 492 |
| fr | 2001_03 | THIS_month:psum | 4.7 | 2.4 | 11.4 | 5.4 | 10.3 | 15.1 | 41.3 | 4.2 | 22.7 | 26.6 | 178.5 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |