| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_03 | THIS_month:psum | 8.1 | 3.5 | 5.9 | 11.8 | 19.5 | 29.3 | 90 | 3.1 | 48.6 | 54.9 | 174.0 |
| fr | 2001_03 | 1e4u:A | 6.1 | 3.3 | 9.672087e+00 | -5.616963e+00 | 1.4e+01 | 2.6e+01 | 9.4e+01 | 4.93e-01 | 5.4e+01 | 5.9e+01 | 78 |
| fr | 2001_03 | 1f75:B | 5.5 | 2.3 | 3.418424e-02 | 2.755514e+00 | 2.8e+00 | 1.0e+01 | 9.7e+01 | 3.59e-01 | 2.9e+01 | 4.0e+01 | 212 |
| fr | 2001_03 | 1fsh:A | 6.0 | 2.6 | -7.269534e+00 | 3.369888e+00 | 1.8e+01 | 3.7e+01 | 8.9e+01 | 2.02e+00 | 4.1e+01 | 5.2e+01 | 94 |
| fr | 2001_03 | 1fw9:A | 2.4 | 2.8 | 3.265215e-01 | -1.137942e+00 | 3.0e+00 | 6.7e+00 | 7.6e+01 | 8.88e-01 | 2.5e+01 | 3.4e+01 | 164 |
| fr | 2001_03 | 1g12:A | 3.0 | 2.3 | 8.474291e+00 | 4.708078e+00 | 3.6e+00 | 7.8e+00 | 9.0e+01 | 1.59e-01 | 2.8e+01 | 3.5e+01 | 167 |
| fr | 2001_03 | 1g2h:A | 6.2 | 4.2 | 2.071271e+01 | 1.116978e+01 | 4.9e+01 | 6.2e+01 | 9.2e+01 | 4.69e+00 | 6.9e+01 | 7.0e+01 | 61 |
| fr | 2001_03 | 1g8e:B | 2.9 | 3.1 | -5.685455e+00 | 1.049933e+01 | 6.2e+00 | 1.4e+01 | 9.9e+01 | 2.83e+01 | 4.8e+01 | 5.5e+01 | 80 |
| fr | 2001_03 | 1gef:E | 2.6 | 3.1 | -5.428508e+00 | -1.397553e+00 | 5.3e+00 | 1.1e+01 | 7.5e+01 | 4.93e+00 | 2.7e+01 | 3.4e+01 | 114 |
| fr | 2001_03 | 1gh5:A | 11.1 | 3.5 | 1.421924e+01 | 1.451632e+01 | 7.1e+01 | 8.2e+01 | 9.4e+01 | 1.62e+00 | 7.7e+01 | 8.2e+01 | 87 |
| fr | 2001_03 | 1hhn:A | 1.0 | 1.6 | -6.940909e+00 | -5.255421e+00 | 9.9e-01 | 3.0e+00 | 8.7e+01 | 2.54e+00 | 2.7e+01 | 3.3e+01 | 101 |
| fr | 2001_03 | 1hn5:A | 15.9 | 4.6 | -2.908571e+00 | 2.445766e+01 | 2.3e+01 | 3.6e+01 | 9.5e+01 | 1.05e-02 | 7.1e+01 | 7.3e+01 | 222 |
| fr | 2001_03 | 1hn5:B | 6.7 | 3.3 | -3.470455e+00 | 9.507719e+00 | 1.3e+01 | 1.8e+01 | 7.9e+01 | 3.48e-06 | 3.6e+01 | 5.2e+01 | 222 |
| fr | 2001_03 | 1hn5:C | 14.2 | 4.1 | -2.503279e+00 | 2.132670e+01 | 2.0e+01 | 3.1e+01 | 9.8e+01 | 5.32e-02 | 6.7e+01 | 6.9e+01 | 248 |
| fr | 2001_03 | 1hn5:D | 6.2 | 3.9 | -2.632759e+00 | 5.549772e+00 | 2.0e+00 | 4.0e+00 | 9.3e+01 | 7.19e-01 | 3.8e+01 | 4.6e+01 | 250 |
| fr | 2001_03 | 1hn5:E | 10.9 | 3.3 | -3.393333e+00 | 1.950249e+01 | 7.9e+00 | 1.3e+01 | 7.9e+01 | 8.76e-01 | 6.0e+01 | 6.1e+01 | 228 |
| fr | 2001_03 | 1hn5:F | 5.8 | 3.3 | -3.571930e+00 | 5.986481e+00 | 6.6e+00 | 1.2e+01 | 7.5e+01 | 5.38e+00 | 2.9e+01 | 3.2e+01 | 227 |
| fr | 2001_03 | 1ho4:A | 23.0 | 5.7 | 1.766189e+00 | 1.678919e+01 | 5.2e+01 | 6.1e+01 | 9.0e+01 | 7.71e-02 | 6.7e+01 | 7.4e+01 | 242 |
| fr | 2001_03 | 1hs7:A | 6.0 | 3.7 | 1.824812e+00 | 1.669009e+01 | 1.8e+01 | 3.2e+01 | 9.9e+01 | 2.20e+00 | 6.5e+01 | 6.9e+01 | 97 |
| fr | 2001_03 | 1hux:A | 22.6 | 4.7 | 2.465092e+00 | 1.105767e+01 | 2.1e+01 | 4.0e+01 | 9.9e+01 | 1.26e-05 | 6.2e+01 | 7.0e+01 | 259 |
| fr | 2001_03 | 1hx1:B | 8.8 | 4.9 | -5.552727e+00 | 1.565356e+01 | 4.8e+01 | 7.1e+01 | 9.8e+01 | 1.72e+00 | 7.0e+01 | 7.5e+01 | 112 |
| fr | 2001_03 | 1i27:A | 7.9 | 3.5 | -8.725714e+00 | 1.770522e+01 | 4.4e+01 | 6.2e+01 | 9.6e+01 | 1.22e+01 | 6.3e+01 | 7.1e+01 | 73 |
| fr | 2001_03 | 1i2j:A | 4.1 | 4.2 | 4.813217e-01 | 1.238503e+00 | 1.8e+00 | 5.1e+00 | 8.6e+01 | 9.91e-02 | 1.7e+01 | 2.2e+01 | 492 |
| fr | 2001_03 | THIS_month:psum | 8.1 | 3.5 | 5.9 | 11.8 | 19.5 | 29.3 | 90 | 3.1 | 48.6 | 54.9 | 174.0 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |