| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_03 | THIS_month:psum | 5.6 | 2.8 | 6.5 | 6.8 | 11.1 | 19.5 | 82.7 | 3.1 | 34.3 | 40.5 | 174.0 |
| fr | 2001_03 | 1e4u:A | 3.0 | 1.6 | -1.057814e+01 | -7.603793e+00 | 7.7e+00 | 2.1e+01 | 7.2e+01 | 4.93e-01 | 2.2e+01 | 3.1e+01 | 78 |
| fr | 2001_03 | 1f75:B | 5.4 | 2.3 | 3.418424e-02 | -3.809873e-01 | 1.9e+00 | 7.1e+00 | 9.7e+01 | 3.59e-01 | 1.9e+01 | 2.6e+01 | 212 |
| fr | 2001_03 | 1fsh:A | 3.3 | 2.6 | -7.726734e+00 | 3.369888e+00 | 7.4e+00 | 1.9e+01 | 8.4e+01 | 2.02e+00 | 3.7e+01 | 4.8e+01 | 94 |
| fr | 2001_03 | 1fw9:A | 2.2 | 1.6 | -6.137047e+00 | -2.680481e+00 | 3.0e+00 | 5.5e+00 | 5.6e+01 | 8.88e-01 | 1.2e+01 | 1.8e+01 | 164 |
| fr | 2001_03 | 1g12:A | 0.8 | 1.2 | 2.920139e+00 | -2.436387e+00 | 1.2e+00 | 7.8e+00 | 6.2e+01 | 1.59e-01 | 6.6e+00 | 2.2e+01 | 167 |
| fr | 2001_03 | 1g2h:A | 6.2 | 4.2 | 2.071271e+01 | 2.766849e+00 | 2.8e+01 | 4.8e+01 | 9.2e+01 | 4.69e+00 | 6.9e+01 | 7.0e+01 | 61 |
| fr | 2001_03 | 1g8e:B | 2.9 | 3.1 | -5.685455e+00 | 1.049933e+01 | 6.2e+00 | 1.4e+01 | 9.0e+01 | 2.83e+01 | 4.8e+01 | 5.5e+01 | 80 |
| fr | 2001_03 | 1gef:E | 2.5 | 1.6 | -6.381603e+00 | -2.260909e+00 | 5.3e+00 | 1.1e+01 | 7.3e+01 | 4.93e+00 | 1.6e+01 | 3.1e+01 | 114 |
| fr | 2001_03 | 1gh5:A | 11.1 | 3.5 | 1.421924e+01 | 1.451632e+01 | 7.1e+01 | 8.2e+01 | 9.2e+01 | 1.62e+00 | 7.7e+01 | 8.2e+01 | 87 |
| fr | 2001_03 | 1hhn:A | 0.4 | 0.7 | -7.731646e+00 | -5.443177e+00 | 9.9e-01 | 2.0e+00 | 7.8e+01 | 2.54e+00 | 1.6e+01 | 1.6e+01 | 101 |
| fr | 2001_03 | 1hn5:A | 15.9 | 3.5 | -2.979512e+00 | 8.003429e+00 | 1.1e+01 | 2.3e+01 | 9.2e+01 | 1.05e-02 | 5.3e+01 | 5.9e+01 | 222 |
| fr | 2001_03 | 1hn5:B | 1.3 | 2.3 | -3.592941e+00 | 6.131994e+00 | 2.3e+00 | 6.8e+00 | 7.7e+01 | 3.48e-06 | 1.8e+01 | 2.4e+01 | 222 |
| fr | 2001_03 | 1hn5:C | 12.3 | 3.3 | -2.513580e+00 | 4.872698e+00 | 7.3e+00 | 2.5e+01 | 9.8e+01 | 5.32e-02 | 4.3e+01 | 5.2e+01 | 248 |
| fr | 2001_03 | 1hn5:D | 6.2 | 3.9 | -2.714667e+00 | 5.549772e+00 | 0.0e+00 | 8.0e-01 | 9.0e+01 | 7.19e-01 | 3.8e+01 | 4.6e+01 | 250 |
| fr | 2001_03 | 1hn5:E | 0.8 | 2.3 | -3.992157e+00 | 1.989688e+00 | 1.3e+00 | 2.2e+00 | 6.7e+01 | 8.76e-01 | 1.1e+01 | 1.4e+01 | 228 |
| fr | 2001_03 | 1hn5:F | 5.8 | 3.3 | -3.817500e+00 | 1.789826e+00 | 2.6e+00 | 8.8e+00 | 7.0e+01 | 5.38e+00 | 2.9e+01 | 3.2e+01 | 227 |
| fr | 2001_03 | 1ho4:A | 11.5 | 3.5 | -1.593662e+00 | 1.073759e+01 | 9.9e+00 | 2.0e+01 | 8.6e+01 | 7.71e-02 | 5.9e+01 | 6.4e+01 | 242 |
| fr | 2001_03 | 1hs7:A | 2.4 | 2.3 | -7.448012e+00 | 7.683646e+00 | 4.1e+00 | 7.2e+00 | 8.1e+01 | 2.20e+00 | 2.9e+01 | 3.1e+01 | 97 |
| fr | 2001_03 | 1hux:A | 17.7 | 3.3 | 1.071938e+00 | 8.437330e+00 | 9.3e+00 | 2.2e+01 | 9.9e+01 | 1.26e-05 | 5.4e+01 | 6.0e+01 | 259 |
| fr | 2001_03 | 1hx1:B | 8.8 | 4.9 | -5.552727e+00 | 1.565356e+01 | 4.8e+01 | 7.1e+01 | 9.8e+01 | 1.72e+00 | 7.0e+01 | 7.5e+01 | 112 |
| fr | 2001_03 | 1i27:A | 2.1 | 3.1 | -1.001311e+01 | -5.777987e+00 | 1.5e+01 | 2.2e+01 | 8.4e+01 | 1.22e+01 | 1.5e+01 | 1.6e+01 | 73 |
| fr | 2001_03 | 1i2j:A | 2.1 | 3.9 | 1.003037e-01 | 5.026524e-01 | 1.4e+00 | 3.3e+00 | 8.3e+01 | 9.91e-02 | 1.5e+01 | 2.0e+01 | 492 |
| fr | 2001_03 | THIS_month:psum | 5.6 | 2.8 | 6.5 | 6.8 | 11.1 | 19.5 | 82.7 | 3.1 | 34.3 | 40.5 | 174.0 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |