| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2001_02 | THIS_month:psum | 3.1 | 2 | 7.6 | 5.7 | 12.8 | 17.0 | 47.7 | 34.3 | 17.6 | 20.4 | 219.2 |
| fr | 2001_02 | 1cwy:A | 1.1 | 2.6 | -7.071276e+00 | -6.447624e-01 | 2.0e-01 | 6.0e-01 | 1.6e+01 | 2.0 | 7.0e+00 | 8.0e+00 | 500 |
| fr | 2001_02 | 1dc1:A | 2.9 | 2.8 | -7.829550e+00 | 1.712383e+00 | 1.6e+00 | 2.6e+00 | 2.5e+01 | 4.1 | 1.1e+01 | 1.5e+01 | 310 |
| fr | 2001_02 | 1ehk:C | 1.0 | 0 | -2.106207e+01 | -1.850909e+01 | 4.5e+01 | 4.5e+01 | 8.8e+01 | 276 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2001_02 | 1f34:B | 2.2 | 2.6 | -2.759276e+00 | 8.071608e-01 | 1.3e+01 | 1.7e+01 | 3.8e+01 | 2.9 | 1.3e+01 | 1.4e+01 | 138 |
| fr | 2001_02 | 1fiu:A | 1.2 | 1.6 | -7.514964e+00 | -1.398122e+00 | 7.0e-01 | 1.4e+00 | 2.6e+01 | 2.1 | 7.7e+00 | 1.2e+01 | 286 |
| fr | 2001_02 | 1fkm:A | 2.0 | 1.2 | -8.982353e+00 | -1.123946e+00 | 0.0e+00 | 6.4e-01 | 2.2e+01 | 12 | 7.3e+00 | 9.6e+00 | 314 |
| fr | 2001_02 | 1fqj:C | 0.4 | 0 | -3.054000e+01 | -1.607368e+01 | 7.9e+00 | 2.1e+01 | 5.3e+01 | 38 | 0.0e+00 | 0.0e+00 | 38 |
| fr | 2001_02 | 1g47:A | 9.0 | 4.1 | 1.441358e+01 | 1.393947e+01 | 7.1e+01 | 8.0e+01 | 8.9e+01 | 4e-14 | 7.6e+01 | 7.9e+01 | 70 |
| fr | 2001_02 | 1g8q:A | 0.9 | 1.6 | -1.850909e+01 | -4.705532e+00 | 1.3e+01 | 2.0e+01 | 3.7e+01 | 4.6 | 2.0e+01 | 2.2e+01 | 90 |
| fr | 2001_02 | 1g8y:A | 16.9 | 4.9 | 8.320475e-01 | 9.872782e+00 | 2.9e+01 | 4.3e+01 | 8.1e+01 | 3e-20 | 5.2e+01 | 5.9e+01 | 242 |
| fr | 2001_02 | 1g9r:A | 1.7 | 1.2 | -9.851225e+00 | -1.608424e+00 | 1.1e+00 | 3.7e+00 | 2.3e+01 | 82 | 5.9e+00 | 8.5e+00 | 271 |
| fr | 2001_02 | 1hqm:E | 3.0 | 2.0 | -3.017222e+00 | 2.230839e+00 | 7.1e+00 | 1.2e+01 | 8.8e+01 | 3.4 | 2.0e+01 | 2.6e+01 | 98 |
| fr | 2001_02 | 1hu3:A | 1.9 | 1.2 | -7.102326e+00 | -9.043698e-01 | 3.1e+00 | 9.2e+00 | 4.4e+01 | 5.5 | 7.1e+00 | 1.2e+01 | 196 |
| fr | 2001_02 | 1i1i:P | 2.5 | 2.6 | -3.689612e+00 | -6.608481e-02 | 1.5e-01 | 3.0e-01 | 2.4e+01 | 7.7 | 5.0e+00 | 6.2e+00 | 665 |
| fr | 2001_02 | 1i25:A | 0.5 | 1.6 | -2.655652e+01 | -1.650811e+01 | 0.0e+00 | 0.0e+00 | 6.2e+01 | 75 | 3.2e+01 | 3.5e+01 | 37 |
| fr | 2001_02 | THIS_month:psum | 3.1 | 2 | 7.6 | 5.7 | 12.8 | 17.0 | 47.7 | 34.3 | 17.6 | 20.4 | 219.2 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |