| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_02 | THIS_month:psum | 2.8 | 1.6 | 13.2 | 6.4 | 9.9 | 12.9 | 40.0 | 34.3 | 15.0 | 17.9 | 219.2 |
| fr | 2001_02 | 1cwy:A | 0.8 | 2.3 | -1.650716e+01 | -9.490801e-01 | 2.0e-01 | 6.0e-01 | 7.4e+00 | 2.0 | 4.6e+00 | 5.0e+00 | 500 |
| fr | 2001_02 | 1dc1:A | 2.9 | 2.8 | -2.106207e+01 | 7.484081e-01 | 9.7e-01 | 1.9e+00 | 9.4e+00 | 4.1 | 6.5e+00 | 6.5e+00 | 310 |
| fr | 2001_02 | 1ehk:C | 1.0 | 0 | -4.072000e+01 | -1.850909e+01 | 4.5e+01 | 4.5e+01 | 4.5e+01 | 276 | 0.0e+00 | 0.0e+00 | 33 |
| fr | 2001_02 | 1f34:B | 0.3 | 0.7 | -1.152451e+01 | -3.885437e+00 | 1.4e+00 | 2.2e+00 | 3.8e+01 | 2.9 | 6.5e+00 | 1.4e+01 | 138 |
| fr | 2001_02 | 1fiu:A | 0.9 | 1.6 | -7.982107e+00 | -1.781953e+00 | 7.0e-01 | 1.4e+00 | 2.6e+01 | 2.1 | 5.2e+00 | 6.6e+00 | 286 |
| fr | 2001_02 | 1fkm:A | 2.0 | 0.7 | -8.982353e+00 | -1.542193e+00 | 0.0e+00 | 6.4e-01 | 2.2e+01 | 12 | 6.7e+00 | 9.6e+00 | 314 |
| fr | 2001_02 | 1fqj:C | 0.1 | 0 | -3.054000e+01 | -1.607368e+01 | 0.0e+00 | 5.3e+00 | 5.3e+01 | 38 | 0.0e+00 | 0.0e+00 | 38 |
| fr | 2001_02 | 1g47:A | 9.0 | 4.1 | 1.322437e+01 | 1.275334e+01 | 6.4e+01 | 8.0e+01 | 8.4e+01 | 4e-14 | 7.1e+01 | 7.9e+01 | 70 |
| fr | 2001_02 | 1g8q:A | 0.9 | 1.2 | -2.776364e+01 | -6.695603e+00 | 6.7e+00 | 8.9e+00 | 2.4e+01 | 4.6 | 1.2e+01 | 1.3e+01 | 90 |
| fr | 2001_02 | 1g8y:A | 16.9 | 4.9 | -2.115511e-01 | 9.872782e+00 | 2.6e+01 | 3.9e+01 | 8.1e+01 | 3e-20 | 5.2e+01 | 5.9e+01 | 242 |
| fr | 2001_02 | 1g9r:A | 0.3 | 0 | -5.090000e+01 | -2.253875e+00 | 3.7e-01 | 3.7e+00 | 4.4e+00 | 82 | 0.0e+00 | 0.0e+00 | 271 |
| fr | 2001_02 | 1hqm:E | 3.0 | 2.0 | -7.085585e+00 | 2.230839e+00 | 2.0e+00 | 3.1e+00 | 8.8e+01 | 3.4 | 2.0e+01 | 2.6e+01 | 98 |
| fr | 2001_02 | 1hu3:A | 1.9 | 1.2 | -7.102326e+00 | -9.043698e-01 | 1.5e+00 | 1.5e+00 | 4.4e+01 | 5.5 | 7.1e+00 | 1.1e+01 | 196 |
| fr | 2001_02 | 1i1i:P | 2.3 | 1.6 | -7.100310e+00 | -1.866939e-01 | 1.5e-01 | 3.0e-01 | 1.2e+01 | 7.7 | 4.1e+00 | 5.1e+00 | 665 |
| fr | 2001_02 | 1i25:A | 0.2 | 1.6 | -2.655652e+01 | -1.650811e+01 | 0.0e+00 | 0.0e+00 | 6.2e+01 | 75 | 3.0e+01 | 3.5e+01 | 37 |
| fr | 2001_02 | THIS_month:psum | 2.8 | 1.6 | 13.2 | 6.4 | 9.9 | 12.9 | 40.0 | 34.3 | 15.0 | 17.9 | 219.2 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |