| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_02 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_02 | THIS_month:psum | 6.1 | 3.1 | 9.7 | 10.2 | 23.7 | 32.8 | 84.4 | 5.2 | 41.9 | 46.5 | 208.9 |
| fr | 2001_02 | 1cwy:A | 16.0 | 2.3 | 5.001783e+00 | 6.072230e+00 | 2.6e+00 | 6.8e+00 | 7.3e+01 | 3.00e-01 | 3.4e+01 | 3.9e+01 | 500 |
| fr | 2001_02 | 1dc1:A | 3.4 | 2.8 | 2.774909e+00 | 3.973963e+00 | 6.5e-01 | 1.3e+00 | 5.0e+01 | 1.03e+00 | 1.3e+01 | 1.5e+01 | 310 |
| fr | 2001_02 | 1ehk:C | 3.8 | 3.7 | 2.683037e+01 | 2.150106e+01 | 8.5e+01 | 8.5e+01 | 1.0e+02 | 1.85e+01 | 8.2e+01 | 8.5e+01 | 33 |
| fr | 2001_02 | 1f34:B | 2.2 | 2.6 | 1.159755e+01 | 5.638314e+00 | 1.4e+00 | 2.9e+00 | 6.7e+01 | 4.53e+00 | 2.1e+01 | 2.7e+01 | 138 |
| fr | 2001_02 | 1fiu:A | 2.6 | 2.8 | 9.818106e-01 | 2.632980e+00 | 7.0e-01 | 1.4e+00 | 7.8e+01 | 1.97e+00 | 1.2e+01 | 1.4e+01 | 286 |
| fr | 2001_02 | 1fqj:C | 0.5 | 1.6 | -1.745143e+01 | -1.393871e+01 | 2.1e+01 | 3.2e+01 | 9.2e+01 | 2.48e+01 | 2.9e+01 | 3.4e+01 | 38 |
| fr | 2001_02 | 1g47:A | 9.1 | 3.9 | 1.870419e+01 | 1.051300e+01 | 4.1e+01 | 7.1e+01 | 9.9e+01 | 9.39e-04 | 7.3e+01 | 7.9e+01 | 70 |
| fr | 2001_02 | 1g8q:A | 3.4 | 3.3 | -7.359036e+00 | 8.875521e+00 | 8.9e+00 | 2.3e+01 | 9.2e+01 | 9.87e+00 | 3.8e+01 | 4.4e+01 | 90 |
| fr | 2001_02 | 1g8y:A | 15.7 | 3.3 | 1.178317e+00 | 1.089490e+01 | 2.6e+01 | 4.0e+01 | 8.9e+01 | 3.07e-06 | 5.3e+01 | 6.1e+01 | 242 |
| fr | 2001_02 | 1hqm:E | 13.3 | 5.0 | 1.696972e+01 | 3.075300e+01 | 5.9e+01 | 8.3e+01 | 9.3e+01 | 3.14e-01 | 9.1e+01 | 9.1e+01 | 98 |
| fr | 2001_02 | 1i1i:P | 2.1 | 3.3 | 3.953414e+00 | 1.372266e+00 | 4.5e-01 | 1.8e+00 | 8.5e+01 | 4.72e-01 | 6.9e+00 | 1.0e+01 | 665 |
| fr | 2001_02 | 1i25:A | 1.8 | 2.6 | -1.698166e+01 | -1.475741e+01 | 3.8e+01 | 4.6e+01 | 9.5e+01 | 1.60e+00 | 5.1e+01 | 5.9e+01 | 37 |
| fr | 2001_02 | THIS_month:psum | 6.1 | 3.1 | 9.7 | 10.2 | 23.7 | 32.8 | 84.4 | 5.2 | 41.9 | 46.5 | 208.9 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |