| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2001_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2001_01 | THIS_month:psum | 2.7 | 1.7 | 12.7 | 7.1 | 8.2 | 11.8 | 52.2 | 14.0 | 20.5 | 24.1 | 149.7 |
| fr | 2001_01 | 1dqe:A | 10.6 | 4.6 | 1.617932e+01 | 1.010617e+01 | 3.4e+01 | 4.1e+01 | 5.2e+01 | 4.1 | 4.3e+01 | 4.7e+01 | 137 |
| fr | 2001_01 | 1ee6:A | 1.0 | 0.7 | -4.691455e+00 | -2.430277e+00 | 1.5e+00 | 3.6e+00 | 6.5e+01 | 0.58 | 1.2e+01 | 1.4e+01 | 197 |
| fr | 2001_01 | 1emx:A | 0.1 | 0 | -3.592941e+01 | -2.036000e+01 | 0.0e+00 | 6.7e+00 | 5.7e+01 | 55 | 0.0e+00 | 0.0e+00 | 30 |
| fr | 2001_01 | 1f0z:A | 1.0 | 1.2 | -1.607368e+01 | -9.254065e+00 | 3.0e+00 | 4.5e+00 | 5.8e+01 | 9.7 | 1.4e+01 | 2.4e+01 | 66 |
| fr | 2001_01 | 1fe6:C | 1.6 | 2.6 | -2.387695e+00 | -1.246531e+01 | 0.0e+00 | 0.0e+00 | 9.4e+01 | 41 | 4.1e+01 | 4.1e+01 | 49 |
| fr | 2001_01 | 1fgg:A | 0.9 | 0.0 | -1.110545e+01 | -1.416271e+00 | 0.0e+00 | 4.0e-01 | 2.2e+01 | 4.7 | 5.6e+00 | 8.8e+00 | 250 |
| fr | 2001_01 | 1fma:D | 2.8 | 1.6 | -1.177849e+01 | -5.965849e+00 | 1.2e+00 | 6.2e+00 | 5.9e+01 | 4.6 | 2.3e+01 | 3.2e+01 | 81 |
| fr | 2001_01 | 1fma:E | 1.8 | 3.5 | -7.725150e+00 | -1.406511e+00 | 7.0e-01 | 2.1e+00 | 5.6e+01 | 0.03 | 2.0e+01 | 2.8e+01 | 142 |
| fr | 2001_01 | 1fye:A | 8.8 | 3.3 | 1.096106e+01 | 1.454555e+00 | 1.2e+01 | 1.6e+01 | 3.8e+01 | 0.03 | 2.7e+01 | 2.9e+01 | 220 |
| fr | 2001_01 | 1fzr:A | 1.1 | 2.0 | -8.982353e+00 | -4.545501e+00 | 0.0e+00 | 2.3e+00 | 5.3e+01 | 8.7 | 1.9e+01 | 2.2e+01 | 129 |
| fr | 2001_01 | 1g1i:A | -0.0 | 0 | -3.817500e+01 | -1.454286e+01 | 2.4e+00 | 1.2e+01 | 3.8e+01 | 55 | 0.0e+00 | 0.0e+00 | 42 |
| fr | 2001_01 | 1g6o:A | 1.3 | 2.0 | -2.532082e+00 | -6.222734e-01 | 6.3e-01 | 1.3e+00 | 5.3e+01 | 0.14 | 8.2e+00 | 1.1e+01 | 317 |
| fr | 2001_01 | 1g71:A | 0.8 | 0.7 | -9.810640e+00 | -1.567610e+00 | 2.9e-01 | 8.7e-01 | 1.8e+01 | 10 | 4.7e+00 | 7.8e+00 | 344 |
| fr | 2001_01 | 1hru:B | 1.1 | 1.2 | -1.071579e+01 | -2.114247e+00 | 1.1e+00 | 3.8e+00 | 3.1e+01 | 2.9 | 1.3e+01 | 1.6e+01 | 182 |
| fr | 2001_01 | 1hx2:A | 7.8 | 3.5 | 1.104442e+01 | 9.911577e+00 | 6.7e+01 | 7.7e+01 | 9.0e+01 | 14 | 7.7e+01 | 8.2e+01 | 60 |
| fr | 2001_01 | THIS_month:psum | 2.7 | 1.7 | 12.7 | 7.1 | 8.2 | 11.8 | 52.2 | 14.0 | 20.5 | 24.1 | 149.7 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |