| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_01 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2001_01 | THIS_month:psum | 7.2 | 3.0 | 12.5 | 9.8 | 31.7 | 40.7 | 89.9 | 2.0 | 50.1 | 57 | 142.0 |
| fr | 2001_01 | 1dqe:A | 11.7 | 3.9 | 7.070486e+00 | 5.991795e+00 | 2.7e+01 | 3.9e+01 | 9.3e+01 | 2.71e-03 | 5.6e+01 | 6.1e+01 | 137 |
| fr | 2001_01 | 1ee6:A | 2.2 | 1.6 | -1.192905e+00 | 3.025121e+00 | 1.0e+00 | 3.6e+00 | 8.9e+01 | 3.17e+00 | 2.7e+01 | 3.5e+01 | 197 |
| fr | 2001_01 | 1emx:A | 3.9 | 2.8 | 1.780867e+01 | 1.518140e+01 | 7.7e+01 | 8.7e+01 | 9.7e+01 | 3.22e+00 | 7.7e+01 | 8.7e+01 | 30 |
| fr | 2001_01 | 1f0z:A | 8.8 | 3.7 | 1.262245e+01 | 1.187059e+01 | 6.2e+01 | 8.0e+01 | 1.0e+02 | 2.18e+00 | 7.0e+01 | 8.5e+01 | 66 |
| fr | 2001_01 | 1fe6:C | 5.6 | 4.1 | 2.972146e+01 | 2.430763e+01 | 6.3e+01 | 7.8e+01 | 8.6e+01 | 1.05e+01 | 7.6e+01 | 7.8e+01 | 49 |
| fr | 2001_01 | 1fgg:A | 17.4 | 3.7 | -2.844382e+00 | 8.329874e+00 | 1.8e+01 | 2.9e+01 | 8.6e+01 | 2.90e-02 | 5.5e+01 | 6.2e+01 | 250 |
| fr | 2001_01 | 1fma:D | 7.8 | 3.5 | 1.627578e+01 | 1.304554e+01 | 4.8e+01 | 5.7e+01 | 9.0e+01 | 3.71e-01 | 7.0e+01 | 7.4e+01 | 81 |
| fr | 2001_01 | 1fma:E | 6.2 | 3.1 | -4.483190e+00 | 1.753437e+00 | 3.5e+00 | 9.2e+00 | 8.0e+01 | 2.14e+00 | 3.1e+01 | 3.5e+01 | 142 |
| fr | 2001_01 | 1fye:A | 7.4 | 2.8 | 6.107374e+00 | 3.794457e+00 | 5.5e+00 | 1.5e+01 | 8.0e+01 | 6.30e-01 | 2.6e+01 | 3.2e+01 | 220 |
| fr | 2001_01 | 1fzr:A | 3.4 | 2.0 | -5.502404e+00 | -3.649262e+00 | 2.3e+00 | 6.2e+00 | 8.6e+01 | 1.75e+00 | 2.2e+01 | 2.9e+01 | 129 |
| fr | 2001_01 | 1g71:A | 4.2 | 2.6 | 2.624408e+00 | -6.001548e-01 | 1.2e+00 | 2.3e+00 | 9.5e+01 | 3.22e-01 | 1.7e+01 | 2.1e+01 | 344 |
| fr | 2001_01 | 1hx2:A | 8.1 | 3.1 | 8.544536e+00 | 1.148273e+01 | 7.2e+01 | 8.3e+01 | 9.7e+01 | 3.16e-01 | 7.5e+01 | 8.5e+01 | 60 |
| fr | 2001_01 | THIS_month:psum | 7.2 | 3.0 | 12.5 | 9.8 | 31.7 | 40.7 | 89.9 | 2.0 | 50.1 | 57 | 142.0 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |