| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2000_12 | THIS_month:psum | 3.8 | 1.9 | 8.9 | 11.5 | 14.0 | 19.5 | 48.8 | 13.5 | 24.8 | 30.2 | 143.2 |
| fr | 2000_12 | 1ci6:A | 8.1 | 5.0 | -1.152453e+01 | 2.796822e+01 | 7.1e+01 | 9.1e+01 | 9.5e+01 | 7e-04 | 7.5e+01 | 8.4e+01 | 56 |
| fr | 2000_12 | 1dkc:A | 0.8 | 2.0 | -2.106180e+01 | -1.598418e+01 | 2.6e+00 | 7.9e+00 | 7.6e+01 | 6.2 | 4.2e+01 | 4.5e+01 | 38 |
| fr | 2000_12 | 1dl9:A | 1.4 | 1.2 | -2.106197e+01 | -1.679853e+00 | 3.7e+00 | 6.2e+00 | 1.2e+01 | 3.8 | 6.6e+00 | 8.2e+00 | 243 |
| fr | 2000_12 | 1e2x:A | 5.9 | 3.9 | -1.526892e+01 | 5.396657e+00 | 1.5e+01 | 1.8e+01 | 1.8e+01 | 0.12 | 1.7e+01 | 1.8e+01 | 222 |
| fr | 2000_12 | 1ekt:A | 0.3 | 0.0 | -3.054000e+01 | -1.152453e+01 | 1.9e+00 | 3.8e+00 | 3.8e+01 | 6.3 | 1.5e+01 | 2.3e+01 | 53 |
| fr | 2000_12 | 1eo1:A | 0.4 | 1.6 | -2.181429e+01 | -2.426590e+00 | 0.0e+00 | 1.6e+00 | 2.3e+01 | 0.62 | 1.5e+01 | 1.9e+01 | 124 |
| fr | 2000_12 | 1f53:A | 0.4 | 1.6 | -1.174615e+01 | -2.430112e+00 | 1.2e+00 | 3.6e+00 | 6.2e+01 | 5.2 | 1.9e+01 | 2.4e+01 | 84 |
| fr | 2000_12 | 1f62:A | 0.1 | 1.2 | -3.393333e+01 | -1.197647e+01 | 9.8e+00 | 2.0e+01 | 3.5e+01 | 11 | 1.8e+01 | 2.5e+01 | 51 |
| fr | 2000_12 | 1f6d:A | 22.4 | 2.8 | 1.545864e+00 | 6.925750e+00 | 2.5e+01 | 3.9e+01 | 8.6e+01 | 3e-14 | 4.3e+01 | 4.9e+01 | 366 |
| fr | 2000_12 | 1fjn:A | 0.3 | 0 | -5.090000e+01 | -1.566154e+01 | 1.5e+01 | 2.3e+01 | 3.1e+01 | 204 | 0.0e+00 | 0.0e+00 | 39 |
| fr | 2000_12 | 1fu1:A | 0.7 | 1.6 | -1.001310e+01 | -2.394916e+00 | 0.0e+00 | 5.7e-01 | 3.5e+01 | 7.0 | 8.6e+00 | 1.1e+01 | 174 |
| fr | 2000_12 | 1fwl:A | 1.8 | 2.6 | -6.962379e-01 | -9.461072e-01 | 6.8e-01 | 3.4e+00 | 2.7e+01 | 0.55 | 1.1e+01 | 1.4e+01 | 296 |
| fr | 2000_12 | 1fx3:A | 2.5 | 2.0 | -1.357333e+01 | -3.847384e+00 | 4.2e+00 | 9.8e+00 | 3.1e+01 | 0.53 | 1.5e+01 | 2.2e+01 | 143 |
| fr | 2000_12 | 1fxk:A | 1.0 | 1.2 | -2.181359e+01 | -5.523205e+00 | 9.7e-01 | 3.9e+00 | 2.7e+01 | 0.25 | 8.7e+00 | 9.7e+00 | 103 |
| fr | 2000_12 | 1fxk:C | 1.6 | 2.0 | -1.411726e+00 | 1.428905e+00 | 7.5e-01 | 2.3e+00 | 6.0e+01 | 0.02 | 2.0e+01 | 2.3e+01 | 133 |
| fr | 2000_12 | 1g3j:B | 0.3 | 0.7 | -1.908750e+01 | -1.489756e+01 | 7.3e+00 | 7.3e+00 | 7.8e+01 | 7.6 | 3.4e+01 | 3.7e+01 | 41 |
| fr | 2000_12 | 1g6g:A | 11.0 | 2.0 | -7.539912e+00 | 1.395251e+01 | 4.7e+01 | 5.4e+01 | 6.4e+01 | 6e-05 | 5.4e+01 | 5.8e+01 | 127 |
| fr | 2000_12 | 1g99:A | 0.6 | 2.3 | -1.526512e+01 | -1.213441e+00 | 2.5e-01 | 2.5e-01 | 1.0e+01 | 1.3 | 5.8e+00 | 8.0e+00 | 398 |
| fr | 2000_12 | 1gak:A | 16.2 | 5.2 | 1.635021e+01 | 1.389340e+01 | 6.4e+01 | 7.6e+01 | 8.7e+01 | 0.01 | 6.6e+01 | 7.6e+01 | 137 |
| fr | 2000_12 | 1hd6:A | 0.4 | 0.7 | -2.036000e+01 | -1.649349e+01 | 1.1e+01 | 1.9e+01 | 8.1e+01 | 17 | 2.4e+01 | 5.1e+01 | 37 |
| fr | 2000_12 | THIS_month:psum | 3.8 | 1.9 | 8.9 | 11.5 | 14.0 | 19.5 | 48.8 | 13.5 | 24.8 | 30.2 | 143.2 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |