| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2000_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2000_12 | THIS_month:psum | 6.0 | 3.2 | 13.3 | 11.7 | 32.4 | 40.8 | 90.2 | 4.0 | 50 | 55.7 | 130.7 |
| fr | 2000_12 | 1ci6:A | 7.3 | 5.0 | -1.246531e+01 | 4.111886e+01 | 8.6e+01 | 8.6e+01 | 8.8e+01 | 3.36e-02 | 8.6e+01 | 8.6e+01 | 56 |
| fr | 2000_12 | 1dkc:A | 5.2 | 2.0 | -2.886313e+00 | 8.815556e-01 | 6.6e+01 | 8.9e+01 | 9.5e+01 | 2.12e+01 | 7.6e+01 | 8.7e+01 | 38 |
| fr | 2000_12 | 1dl9:A | 3.3 | 3.1 | -2.332923e+00 | -2.802097e-01 | 1.6e+00 | 4.5e+00 | 8.2e+01 | 4.55e+00 | 1.6e+01 | 2.0e+01 | 243 |
| fr | 2000_12 | 1e2x:A | 3.7 | 2.8 | 5.622489e+00 | 4.117771e+00 | 1.4e+00 | 2.3e+00 | 9.3e+01 | 1.81e+00 | 2.2e+01 | 2.9e+01 | 222 |
| fr | 2000_12 | 1ekt:A | 1.8 | 2.6 | -8.324446e+00 | -7.078737e+00 | 1.1e+01 | 1.9e+01 | 9.2e+01 | 3.60e+00 | 4.2e+01 | 4.7e+01 | 53 |
| fr | 2000_12 | 1eo1:A | 7.6 | 3.9 | 8.454220e+00 | 4.286794e+00 | 2.1e+01 | 3.2e+01 | 9.7e+01 | 1.30e+00 | 4.3e+01 | 5.2e+01 | 124 |
| fr | 2000_12 | 1f53:A | 6.5 | 3.3 | -3.828182e+00 | 7.378382e+00 | 2.0e+01 | 4.6e+01 | 9.2e+01 | 9.35e+00 | 6.0e+01 | 6.5e+01 | 84 |
| fr | 2000_12 | 1f62:A | 4.2 | 2.3 | -7.974286e-01 | -1.017149e+00 | 4.1e+01 | 5.1e+01 | 9.4e+01 | 3.38e+00 | 4.5e+01 | 5.5e+01 | 51 |
| fr | 2000_12 | 1fjn:A | 5.0 | 3.1 | 1.866813e+01 | 1.697154e+01 | 7.7e+01 | 8.7e+01 | 9.2e+01 | 1.01e-01 | 7.9e+01 | 8.7e+01 | 39 |
| fr | 2000_12 | 1fwl:A | 5.1 | 2.6 | -2.195494e-01 | 1.026255e+00 | 1.0e+00 | 2.4e+00 | 8.5e+01 | 2.05e+00 | 1.6e+01 | 2.0e+01 | 296 |
| fr | 2000_12 | 1fx3:A | 2.3 | 2.6 | -2.363602e+00 | 4.047600e+00 | 5.6e+00 | 9.8e+00 | 7.6e+01 | 3.01e+00 | 3.0e+01 | 3.6e+01 | 143 |
| fr | 2000_12 | 1fxk:C | 6.1 | 3.7 | 1.355735e+01 | 1.300663e+01 | 9.8e+00 | 1.7e+01 | 8.8e+01 | 1.72e+00 | 4.7e+01 | 5.1e+01 | 133 |
| fr | 2000_12 | 1g3j:B | 0.6 | 1.2 | -1.607368e+01 | -1.489752e+01 | 0.0e+00 | 2.4e+00 | 9.3e+01 | 1.45e+01 | 2.7e+01 | 3.4e+01 | 41 |
| fr | 2000_12 | 1g6g:A | 13.9 | 4.2 | -5.261950e+00 | 1.708377e+01 | 5.8e+01 | 6.9e+01 | 9.1e+01 | 1.81e-03 | 7.5e+01 | 8.0e+01 | 127 |
| fr | 2000_12 | 1g99:A | 8.3 | 2.8 | 6.662706e+00 | 2.340388e+00 | 1.8e+00 | 3.5e+00 | 8.2e+01 | 1.67e+00 | 2.2e+01 | 2.4e+01 | 398 |
| fr | 2000_12 | 1gak:A | 17.2 | 5.5 | 1.557311e+01 | 1.617663e+01 | 5.8e+01 | 7.4e+01 | 9.4e+01 | 1.69e-08 | 7.2e+01 | 7.8e+01 | 137 |
| fr | 2000_12 | 1hd6:A | 5.2 | 3.7 | 2.472832e+01 | 2.472831e+01 | 9.2e+01 | 1.0e+02 | 1.0e+02 | 3.49e-06 | 9.2e+01 | 9.7e+01 | 37 |
| fr | 2000_12 | THIS_month:psum | 6.0 | 3.2 | 13.3 | 11.7 | 32.4 | 40.8 | 90.2 | 4.0 | 50 | 55.7 | 130.7 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |