| METHOD about: | ../../../doc/explain_methods.html#PX_about_ssearch |
| METHOD url: | ssearch |
| TYPE : | fr |
| NPROT : | 537 |
| NWEEKS : | 230 |
| NOTE 1 : | here ALL results obtained for ssearch in month 2000_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.5 | 2.2 | 1.8 | 3.4 | 11.3 | 16.0 | 84.5 | 4.6 | 29.5 | 35.4 | 154.1 |
| fr | 2000_11 | THIS_month:psum | 2.5 | 2.4 | 19.7 | 17.2 | 23.0 | 29.3 | 88.3 | 8.5 | 39.3 | 44.5 | 107.7 |
| fr | 2000_11 | 1by6:A | 0.1 | 0.7 | -1.696667e+01 | -1.696667e+01 | 0.0e+00 | 0.0e+00 | 1.0e+02 | 5.8 | 2.5e+01 | 3.3e+01 | 36 |
| fr | 2000_11 | 1dd3:C | 0.7 | 1.2 | -1.908749e+01 | -1.908124e+01 | 1.2e+01 | 3.4e+01 | 1.0e+02 | 48 | 4.4e+01 | 5.0e+01 | 32 |
| fr | 2000_11 | 1dh3:A | 5.7 | 5.0 | -1.152453e+01 | 2.708562e+01 | 9.3e+01 | 9.3e+01 | 9.6e+01 | 0.00 | 9.3e+01 | 9.3e+01 | 55 |
| fr | 2000_11 | 1dpu:A | 1.1 | 2.6 | -8.852174e+00 | 1.246372e-01 | 0.0e+00 | 1.4e+00 | 1.0e+02 | 3.6 | 3.0e+01 | 3.6e+01 | 69 |
| fr | 2000_11 | 1e0f:J | 0.2 | 2.3 | -1.745116e+01 | -1.105988e+01 | 3.6e+00 | 2.2e+01 | 6.4e+01 | 0.19 | 2.2e+01 | 3.3e+01 | 55 |
| fr | 2000_11 | 1e79:I | 0.6 | 2.3 | -1.011790e+01 | -5.220118e+00 | 4.3e+00 | 1.5e+01 | 8.7e+01 | 35 | 4.9e+01 | 4.9e+01 | 47 |
| fr | 2000_11 | 1ehx:A | 1.4 | 2.6 | -4.336631e-01 | 4.735109e+00 | 6.4e+00 | 2.7e+01 | 9.3e+01 | 4.9 | 5.4e+01 | 6.2e+01 | 94 |
| fr | 2000_11 | 1eij:A | 2.7 | 3.1 | -8.172461e+00 | -5.157982e+00 | 1.4e+00 | 4.2e+00 | 9.6e+01 | 22 | 2.5e+01 | 3.5e+01 | 72 |
| fr | 2000_11 | 1ev0:A | 0.5 | 2.0 | -1.053103e+01 | -4.106049e+00 | 0.0e+00 | 1.2e+01 | 1.0e+02 | 8.3 | 4.1e+01 | 4.5e+01 | 58 |
| fr | 2000_11 | 1f6v:A | 2.8 | 1.6 | -4.826010e+00 | -2.618056e+00 | 2.2e+00 | 7.7e+00 | 9.6e+01 | 7.9 | 3.3e+01 | 3.8e+01 | 91 |
| fr | 2000_11 | 1fc3:A | 2.2 | 2.8 | -5.265517e+00 | -4.222593e-01 | 5.9e+00 | 7.6e+00 | 9.7e+01 | 10 | 1.3e+01 | 1.8e+01 | 119 |
| fr | 2000_11 | 1fd4:A | 5.4 | 3.3 | 2.285848e+01 | 2.068960e+01 | 7.8e+01 | 9.0e+01 | 9.0e+01 | 3.2e-06 | 8.0e+01 | 8.3e+01 | 41 |
| fr | 2000_11 | 1fmh:A | 4.3 | 3.9 | 4.446650e+01 | 4.446644e+01 | 9.7e+01 | 1.0e+02 | 1.0e+02 | 0.07 | 9.7e+01 | 1.0e+02 | 31 |
| fr | 2000_11 | 1fmh:B | 3.9 | 3.7 | 3.870381e+01 | 3.620675e+01 | 9.0e+01 | 9.4e+01 | 9.4e+01 | 0.14 | 8.1e+01 | 8.1e+01 | 31 |
| fr | 2000_11 | 1fp3:A | 2.5 | 2.0 | 1.717414e+00 | -5.382176e-01 | 2.5e-01 | 1.0e-00 | 6.3e+01 | 12 | 9.2e+00 | 1.4e+01 | 402 |
| fr | 2000_11 | 1fsi:A | 0.8 | 2.0 | 3.282696e+00 | 2.242738e+00 | 0.0e+00 | 5.6e-01 | 7.5e+01 | 11 | 1.3e+01 | 1.9e+01 | 179 |
| fr | 2000_11 | 1fva:A | 1.9 | 1.2 | -4.397736e+00 | -1.327056e+00 | 1.0e+00 | 2.5e+00 | 6.9e+01 | 2.3 | 1.2e+01 | 1.5e+01 | 200 |
| fr | 2000_11 | 1fy7:A | 1.3 | 2.0 | -2.205397e+00 | -1.513077e+00 | 2.2e+00 | 5.5e+00 | 9.9e+01 | 1.7 | 7.7e+00 | 1.8e+01 | 273 |
| fr | 2000_11 | 1fyw:A | 0.7 | 2.0 | -7.932468e+00 | -3.661549e+00 | 1.4e+00 | 2.8e+00 | 5.4e+01 | 6.8 | 1.1e+01 | 1.5e+01 | 142 |
| fr | 2000_11 | 1g1p:A | 1.1 | 1.6 | -1.970307e+01 | -1.970303e+01 | 2.3e+01 | 3.2e+01 | 1.0e+02 | 2.8 | 2.9e+01 | 3.2e+01 | 31 |
| fr | 2000_11 | 1g26:A | 4.1 | 3.3 | 7.198722e+00 | 6.966504e+00 | 8.7e+01 | 9.4e+01 | 9.7e+01 | 1.7e-07 | 8.7e+01 | 9.4e+01 | 31 |
| fr | 2000_11 | 1g5r:A | 2.3 | 1.2 | -4.147406e+00 | -3.141876e+00 | 2.6e+00 | 4.6e+00 | 9.4e+01 | 5.8 | 1.6e+01 | 2.0e+01 | 152 |
| fr | 2000_11 | 1g62:A | 1.2 | 2.6 | -4.167542e+00 | -9.044125e-01 | 8.9e-01 | 1.8e+00 | 6.2e+01 | 4.2 | 1.8e+01 | 2.5e+01 | 224 |
| fr | 2000_11 | 1g7d:A | 1.3 | 2.8 | -6.497872e+00 | -4.301251e+00 | 2.8e+00 | 5.7e+00 | 8.9e+01 | 22 | 2.3e+01 | 2.5e+01 | 106 |
| fr | 2000_11 | 1g7e:A | 14.9 | 4.4 | -5.337685e+00 | 1.236444e+01 | 6.1e+01 | 7.5e+01 | 9.3e+01 | 0.01 | 7.1e+01 | 8.0e+01 | 122 |
| fr | 2000_11 | THIS_month:psum | 2.5 | 2.4 | 19.7 | 17.2 | 23.0 | 29.3 | 88.3 | 8.5 | 39.3 | 44.5 | 107.7 |
| fr | 2004_03_05 | psum | 2.5 | 2.2 | 1.8 | 3.4 | 11.3 | 16.0 | 84.5 | 4.6 | 29.5 | 35.4 | 154.1 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |