| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2000_11 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| fr | 2000_11 | THIS_month:psum | 6.2 | 3.1 | 9.2 | 11.4 | 33.5 | 44.0 | 90.3 | 6.5 | 51.0 | 56.7 | 115.3 |
| fr | 2000_11 | 1by6:A | 1.2 | 2.0 | -1.696667e+01 | -1.655436e+01 | 2.2e+01 | 3.9e+01 | 1.0e+02 | 2.51e+01 | 4.2e+01 | 4.7e+01 | 36 |
| fr | 2000_11 | 1dd3:C | 4.1 | 2.6 | 3.902685e+00 | 3.657975e+00 | 7.8e+01 | 8.4e+01 | 1.0e+02 | 1.65e+01 | 7.2e+01 | 7.5e+01 | 32 |
| fr | 2000_11 | 1dh3:A | 8.4 | 5.0 | -1.110545e+01 | 4.700810e+01 | 1.0e+02 | 1.0e+02 | 1.0e+02 | 3.03e-01 | 1.0e+02 | 1.0e+02 | 55 |
| fr | 2000_11 | 1dpu:A | 10.3 | 3.9 | -8.852174e+00 | 2.143508e+01 | 7.8e+01 | 8.6e+01 | 1.0e+02 | 1.26e+00 | 8.6e+01 | 8.8e+01 | 69 |
| fr | 2000_11 | 1e0f:J | 1.0 | 2.3 | -1.246517e+01 | -9.928301e+00 | 1.1e+01 | 2.2e+01 | 8.9e+01 | 7.57e+00 | 2.7e+01 | 3.6e+01 | 55 |
| fr | 2000_11 | 1e79:I | 2.5 | 2.6 | -1.525659e+01 | -1.289880e+01 | 1.7e+01 | 4.3e+01 | 8.5e+01 | 1.49e+01 | 4.0e+01 | 4.9e+01 | 47 |
| fr | 2000_11 | 1ehx:A | 7.1 | 3.3 | 2.001263e+00 | 4.177187e+00 | 1.7e+01 | 4.1e+01 | 9.0e+01 | 1.55e+01 | 5.4e+01 | 6.4e+01 | 94 |
| fr | 2000_11 | 1eij:A | 1.8 | 2.8 | -1.641190e+00 | -1.378173e+00 | 5.6e+00 | 1.1e+01 | 9.7e+01 | 1.49e+01 | 3.9e+01 | 4.3e+01 | 72 |
| fr | 2000_11 | 1ev0:A | 6.1 | 3.3 | -1.071579e+01 | 4.103136e+00 | 2.4e+01 | 4.0e+01 | 9.8e+01 | 1.60e+01 | 5.7e+01 | 6.7e+01 | 58 |
| fr | 2000_11 | 1f6v:A | 1.6 | 2.6 | -5.300150e+00 | -2.239745e+00 | 2.2e+00 | 4.4e+00 | 9.5e+01 | 7.51e-01 | 2.9e+01 | 3.2e+01 | 91 |
| fr | 2000_11 | 1fc3:A | 6.4 | 3.1 | -7.448780e+00 | 5.044819e+00 | 8.4e+00 | 1.6e+01 | 6.9e+01 | 4.40e+00 | 3.3e+01 | 3.8e+01 | 119 |
| fr | 2000_11 | 1fd4:A | 5.6 | 3.9 | 3.407599e+01 | 2.162859e+01 | 7.6e+01 | 9.3e+01 | 9.8e+01 | 2.26e-02 | 8.0e+01 | 8.3e+01 | 41 |
| fr | 2000_11 | 1fp3:A | 20.1 | 4.6 | 5.902220e+00 | 8.774469e+00 | 1.7e+01 | 3.1e+01 | 9.4e+01 | 6.53e-01 | 5.2e+01 | 6.3e+01 | 402 |
| fr | 2000_11 | 1fsi:A | 3.0 | 1.2 | 5.432947e+00 | 1.695434e+00 | 2.8e+00 | 5.0e+00 | 7.0e+01 | 4.87e+00 | 1.4e+01 | 1.8e+01 | 179 |
| fr | 2000_11 | 1fva:A | 7.2 | 3.3 | -3.198704e+00 | 4.201203e+00 | 2.3e+01 | 2.8e+01 | 8.1e+01 | 4.13e-01 | 2.7e+01 | 3.0e+01 | 200 |
| fr | 2000_11 | 1fy7:A | 16.0 | 3.7 | -2.587967e+00 | 1.147286e+01 | 2.4e+01 | 4.1e+01 | 8.6e+01 | 6.23e-02 | 5.6e+01 | 6.2e+01 | 273 |
| fr | 2000_11 | 1g26:A | 4.1 | 3.3 | 1.189273e+01 | 1.189265e+01 | 8.7e+01 | 9.4e+01 | 1.0e+02 | 5.82e-03 | 8.7e+01 | 9.4e+01 | 31 |
| fr | 2000_11 | 1g62:A | 2.6 | 1.6 | 1.468759e+00 | -1.316250e+00 | 1.8e+00 | 5.8e+00 | 7.0e+01 | 3.30e+00 | 1.7e+01 | 2.5e+01 | 224 |
| fr | 2000_11 | 1g7d:A | 2.2 | 3.3 | -5.988235e+00 | 3.260985e+00 | 1.0e+01 | 1.8e+01 | 9.6e+01 | 4.12e+00 | 3.5e+01 | 4.2e+01 | 106 |
| fr | 2000_11 | 1g7e:A | 14.1 | 4.4 | -5.657202e+00 | 1.223182e+01 | 6.6e+01 | 7.9e+01 | 8.8e+01 | 1.30e-07 | 7.4e+01 | 7.8e+01 | 122 |
| fr | 2000_11 | THIS_month:psum | 6.2 | 3.1 | 9.2 | 11.4 | 33.5 | 44.0 | 90.3 | 6.5 | 51.0 | 56.7 | 115.3 |
| fr | 2004_03_05 | psum | 6.0 | 3.1 | 4.0 | 7.3 | 23.2 | 32.4 | 87.2 | 7.1 | 43.4 | 49.3 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |