| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2000_10 | THIS_month:psum | 2.3 | 1.9 | 11.5 | 7.4 | 11.1 | 17.0 | 43.8 | 17.5 | 19.6 | 24.1 | 166.4 |
| fr | 2000_10 | 1d7b:A | 0.7 | 0.0 | -1.607368e+01 | -3.086543e+00 | 3.2e+00 | 6.5e+00 | 2.1e+01 | 0.25 | 8.1e+00 | 1.1e+01 | 185 |
| fr | 2000_10 | 1e68:A | 1.5 | 2.0 | -1.096518e+01 | -5.116812e+00 | 1.6e+01 | 2.9e+01 | 5.7e+01 | 26 | 2.1e+01 | 3.0e+01 | 70 |
| fr | 2000_10 | 1eje:A | 1.7 | 1.6 | -4.614159e+00 | -1.512886e+00 | 5.2e-01 | 2.1e+00 | 6.9e+01 | 1.1 | 1.6e+01 | 1.9e+01 | 192 |
| fr | 2000_10 | 1ev7:B | 2.7 | 0 | -2.655630e+01 | -1.445436e+00 | 3.4e+00 | 5.5e+00 | 7.8e+00 | 11 | 0.0e+00 | 0.0e+00 | 293 |
| fr | 2000_10 | 1ezf:A | 2.7 | 3.5 | -1.584906e+00 | 2.724961e+00 | 6.2e-01 | 1.2e+00 | 2.1e+01 | 7.1 | 1.3e+01 | 1.4e+01 | 323 |
| fr | 2000_10 | 1f3u:A | 0.5 | 2.0 | -1.970323e+01 | -5.018232e+00 | 5.1e+00 | 7.6e+00 | 2.6e+01 | 3.5 | 1.4e+01 | 1.9e+01 | 118 |
| fr | 2000_10 | 1f3u:B | 1.7 | 0.7 | -8.602002e+00 | -2.713471e+00 | 2.2e+00 | 7.9e+00 | 5.1e+01 | 0.90 | 1.4e+01 | 2.0e+01 | 139 |
| fr | 2000_10 | 1f81:A | 1.8 | 2.0 | -3.033929e+01 | -6.938973e+00 | 1.4e+01 | 2.0e+01 | 2.3e+01 | 114 | 1.6e+01 | 1.8e+01 | 87 |
| fr | 2000_10 | 1fh6:A | 2.6 | 2.3 | -6.711757e+00 | -1.981218e-01 | 7.1e-01 | 2.1e+00 | 3.2e+01 | 0.96 | 1.2e+01 | 1.5e+01 | 280 |
| fr | 2000_10 | 1fho:A | 2.4 | 2.6 | 2.162614e+00 | -4.161079e+00 | 1.4e+01 | 1.7e+01 | 6.1e+01 | 1.0 | 1.7e+01 | 2.4e+01 | 119 |
| fr | 2000_10 | 1fl4:A | 5.5 | 2.8 | -5.816047e+00 | 2.720992e+00 | 1.3e+01 | 1.5e+01 | 5.5e+01 | 2.2 | 1.4e+01 | 1.6e+01 | 192 |
| fr | 2000_10 | 1fnn:A | 9.2 | 3.9 | 1.889116e+01 | 3.449003e+00 | 1.3e+01 | 1.5e+01 | 3.0e+01 | 0.00 | 1.4e+01 | 1.6e+01 | 379 |
| fr | 2000_10 | 1fqy:A | 0.3 | 1.2 | -1.387132e+01 | -2.468099e+00 | 0.0e+00 | 4.4e-01 | 1.9e+01 | 7.7 | 8.4e+00 | 1.1e+01 | 226 |
| fr | 2000_10 | 1fu9:A | 1.0 | 1.2 | -2.262148e+01 | -1.695919e+01 | 1.1e+01 | 3.3e+01 | 7.5e+01 | 39 | 3.9e+01 | 5.3e+01 | 36 |
| fr | 2000_10 | 1fv5:A | 2.1 | 2.6 | 1.364596e+01 | -1.678113e+01 | 5.6e+01 | 5.8e+01 | 8.1e+01 | 25 | 5.6e+01 | 5.6e+01 | 36 |
| fr | 2000_10 | 1fwq:A | 1.1 | 2.0 | -1.388175e+01 | -1.358263e+00 | 2.6e+00 | 7.8e+00 | 3.8e+01 | 15 | 1.5e+01 | 1.8e+01 | 115 |
| fr | 2000_10 | 1gd2:I | 2.1 | 3.1 | -1.970323e+01 | 2.086061e+01 | 3.5e+01 | 6.2e+01 | 7.8e+01 | 43 | 5.7e+01 | 7.0e+01 | 40 |
| fr | 2000_10 | THIS_month:psum | 2.3 | 1.9 | 11.5 | 7.4 | 11.1 | 17.0 | 43.8 | 17.5 | 19.6 | 24.1 | 166.4 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |