| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_08 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2000_08 | THIS_month:psum | 2.8 | 1.0 | 12.4 | 8.8 | 5.6 | 9.9 | 27.0 | 8.0 | 12.4 | 15.4 | 265.6 |
| fr | 2000_08 | 1dw7:A | 0.3 | 0.0 | -2.349230e+01 | -8.590964e+00 | 4.2e+00 | 1.4e+01 | 3.7e+01 | 20 | 1.4e+01 | 2.1e+01 | 71 |
| fr | 2000_08 | 1eej:A | 11.3 | 3.9 | 1.248479e+01 | 8.871693e+00 | 2.2e+01 | 2.9e+01 | 5.7e+01 | 1e-11 | 3.8e+01 | 4.2e+01 | 216 |
| fr | 2000_08 | 1es6:A | 0.9 | 0.7 | -1.327826e+01 | -1.951913e+00 | 0.0e+00 | 1.2e+00 | 1.8e+01 | 3.1 | 6.5e+00 | 7.3e+00 | 260 |
| fr | 2000_08 | 1fa0:A | 0.5 | 0 | -1.902347e+01 | -1.146984e+00 | 5.9e-01 | 1.4e+00 | 6.3e+00 | 11 | 0.0e+00 | 0.0e+00 | 509 |
| fr | 2000_08 | 1fgx:A | 1.2 | 0.7 | -1.299574e+01 | -1.662062e+00 | 1.5e+00 | 4.0e+00 | 1.7e+01 | 6.2 | 3.7e+00 | 7.0e+00 | 272 |
| fr | 2000_08 | THIS_month:psum | 2.8 | 1.0 | 12.4 | 8.8 | 5.6 | 9.9 | 27.0 | 8.0 | 12.4 | 15.4 | 265.6 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |