| METHOD about: | ../../../doc/explain_methods.html#PX_about_ssearch |
| METHOD url: | ssearch |
| TYPE : | fr |
| NPROT : | 537 |
| NWEEKS : | 230 |
| NOTE 1 : | here ALL results obtained for ssearch in month 2000_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.4 | 2.7 | 2.6 | 5.0 | 14.2 | 20.1 | 92.6 | 4.6 | 35.1 | 40.9 | 154.1 |
| fr | 2000_07 | THIS_month:psum | 3.3 | 2.5 | 18.5 | 7.8 | 10.7 | 14.3 | 91.2 | 5.6 | 30.3 | 35.2 | 175.2 |
| fr | 2000_07 | 1c01:A | 4.0 | 2.3 | -8.107353e+00 | -3.299805e+00 | 3.9e+00 | 7.9e+00 | 9.9e+01 | 3.8 | 3.0e+01 | 3.7e+01 | 76 |
| fr | 2000_07 | 1c55:A | 5.4 | 3.9 | 2.963251e+01 | 2.293736e+01 | 9.0e+01 | 9.2e+01 | 9.2e+01 | 1.2e-06 | 8.8e+01 | 9.0e+01 | 40 |
| fr | 2000_07 | 1c8u:A | 2.9 | 3.1 | -2.832596e+00 | 4.785145e-01 | 7.0e-01 | 1.8e+00 | 7.2e+01 | 6.5 | 1.2e+01 | 1.7e+01 | 285 |
| fr | 2000_07 | 1dov:A | 2.1 | 3.1 | -2.145896e+00 | 1.387767e+00 | 1.1e+00 | 1.7e+00 | 9.9e+01 | 4.8 | 1.5e+01 | 1.7e+01 | 181 |
| fr | 2000_07 | 1dow:B | 0.6 | 1.6 | -1.970323e+01 | -1.934750e+01 | 9.7e+00 | 3.2e+01 | 1.0e+02 | 15 | 4.5e+01 | 5.2e+01 | 31 |
| fr | 2000_07 | 1dry:A | 1.3 | 2.3 | -1.639803e+00 | -4.073675e-01 | 1.9e+00 | 3.8e+00 | 9.5e+01 | 6.6 | 1.6e+01 | 2.2e+01 | 316 |
| fr | 2000_07 | 1dtd:B | 1.3 | 1.2 | -1.017992e+01 | -8.646878e+00 | 9.8e+00 | 1.3e+01 | 9.8e+01 | 2.4 | 2.6e+01 | 3.4e+01 | 61 |
| fr | 2000_07 | 1dvo:A | 2.0 | 3.3 | 3.060984e+00 | 3.588987e+00 | 3.3e+00 | 4.6e+00 | 9.9e+01 | 14 | 1.7e+01 | 2.1e+01 | 152 |
| fr | 2000_07 | 1e2t:F | 1.4 | 2.6 | -1.193158e+00 | 2.529472e-01 | 1.1e+00 | 4.4e+00 | 9.4e+01 | 7.8 | 1.4e+01 | 2.0e+01 | 274 |
| fr | 2000_07 | 1ej6:D | 1.9 | 2.0 | -3.226644e+00 | -9.757760e-01 | 4.8e-01 | 1.2e+00 | 4.5e+01 | 4.7 | 8.6e+00 | 1.1e+01 | 417 |
| fr | 2000_07 | 1eom:A | 17.0 | 3.9 | -1.504488e+00 | 1.235726e+01 | 1.1e+01 | 1.7e+01 | 9.5e+01 | 0.27 | 5.8e+01 | 6.4e+01 | 283 |
| fr | 2000_07 | 1eww:A | 2.0 | 0.7 | -6.874909e+00 | -6.377792e+00 | 5.6e+00 | 6.7e+00 | 9.8e+01 | 12 | 1.9e+01 | 2.7e+01 | 90 |
| fr | 2000_07 | 1exk:A | 0.6 | 1.2 | -8.367122e+00 | -6.353083e+00 | 1.3e+00 | 2.5e+00 | 9.2e+01 | 0.12 | 2.4e+01 | 3.2e+01 | 79 |
| fr | 2000_07 | 1exz:D | 2.0 | 3.5 | -8.483333e+00 | 7.848917e+00 | 8.1e-01 | 8.1e-01 | 5.8e+01 | 4.2 | 2.3e+01 | 2.4e+01 | 124 |
| fr | 2000_07 | 1f02:T | 2.6 | 3.3 | -9.254545e+00 | 1.156340e+01 | 6.1e+00 | 9.1e+00 | 1.0e+02 | 15 | 4.2e+01 | 4.2e+01 | 66 |
| fr | 2000_07 | 1f0j:A | 1.5 | 2.0 | -2.416574e-01 | 2.774990e+00 | 1.1e+00 | 1.7e+00 | 9.9e+01 | 0.97 | 1.1e+01 | 1.7e+01 | 351 |
| fr | 2000_07 | 1f0k:A | 5.1 | 3.1 | -1.542895e+00 | 6.119276e+00 | 1.7e+00 | 4.8e+00 | 9.6e+01 | 0.7 | 3.3e+01 | 3.6e+01 | 351 |
| fr | 2000_07 | 1f37:A | 2.8 | 2.3 | -2.435818e+00 | 5.502342e-01 | 4.6e+00 | 9.2e+00 | 9.9e+01 | 2.2 | 2.8e+01 | 3.9e+01 | 109 |
| fr | 2000_07 | 1f8x:A | 3.1 | 2.6 | -3.997978e+00 | -1.148632e-01 | 1.3e+00 | 5.1e+00 | 9.7e+01 | 11 | 2.2e+01 | 2.4e+01 | 156 |
| fr | 2000_07 | 1f94:A | 7.9 | 2.6 | 2.292424e+01 | 2.376508e+01 | 5.9e+01 | 6.7e+01 | 9.7e+01 | 0.00 | 7.5e+01 | 7.8e+01 | 63 |
| fr | 2000_07 | THIS_month:psum | 3.3 | 2.5 | 18.5 | 7.8 | 10.7 | 14.3 | 91.2 | 5.6 | 30.3 | 35.2 | 175.2 |
| fr | 2004_03_05 | psum | 3.4 | 2.7 | 2.6 | 5.0 | 14.2 | 20.1 | 92.6 | 4.6 | 35.1 | 40.9 | 154.1 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |