| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2000_07 | THIS_month:psum | 2.7 | 2.0 | 12.4 | 10.6 | 8.3 | 13.1 | 44.8 | 9.4 | 21.1 | 24.7 | 175.2 |
| fr | 2000_07 | 1c01:A | 0.5 | 1.2 | -1.607305e+01 | -4.449969e+00 | 3.9e+00 | 7.9e+00 | 5.0e+01 | 2.1 | 1.8e+01 | 2.4e+01 | 76 |
| fr | 2000_07 | 1c55:A | 5.2 | 3.9 | 2.666397e+01 | 1.843606e+01 | 8.2e+01 | 8.8e+01 | 9.0e+01 | 0.08 | 8.0e+01 | 8.2e+01 | 40 |
| fr | 2000_07 | 1c8u:A | 1.7 | 2.6 | -1.192182e+01 | -1.696196e+00 | 7.0e-01 | 2.5e+00 | 1.8e+01 | 1.1 | 9.1e+00 | 9.5e+00 | 285 |
| fr | 2000_07 | 1dov:A | 8.4 | 3.7 | 1.051868e+01 | 7.500117e+00 | 9.4e+00 | 1.1e+01 | 3.2e+01 | 0.25 | 2.7e+01 | 2.7e+01 | 181 |
| fr | 2000_07 | 1dow:B | 0.6 | 1.2 | -2.106207e+01 | -1.926832e+01 | 9.7e+00 | 3.2e+01 | 9.4e+01 | 18 | 4.2e+01 | 4.5e+01 | 31 |
| fr | 2000_07 | 1dry:A | 1.2 | 1.6 | -1.566154e+01 | -1.412459e+00 | 3.2e-01 | 3.2e-01 | 1.2e+01 | 3.7 | 3.8e+00 | 5.4e+00 | 316 |
| fr | 2000_07 | 1dtd:B | 0.9 | 1.2 | -1.357323e+01 | -9.567490e+00 | 4.9e+00 | 1.6e+01 | 7.4e+01 | 15 | 1.5e+01 | 2.1e+01 | 61 |
| fr | 2000_07 | 1dvo:A | 1.1 | 2.6 | -1.151461e+01 | -3.567715e+00 | 2.6e+00 | 7.9e+00 | 3.5e+01 | 11 | 1.2e+01 | 1.4e+01 | 152 |
| fr | 2000_07 | 1e2t:F | 1.0 | 2.6 | -1.650759e+01 | -1.149584e+00 | 3.6e-01 | 2.2e+00 | 1.4e+01 | 7.7 | 6.6e+00 | 6.9e+00 | 274 |
| fr | 2000_07 | 1ej6:D | 1.7 | 2.6 | -1.020012e+01 | -8.444657e-01 | 1.2e+00 | 3.1e+00 | 1.4e+01 | 26 | 5.8e+00 | 7.7e+00 | 417 |
| fr | 2000_07 | 1eom:A | 12.7 | 3.7 | -3.499310e+00 | 9.412933e+00 | 1.9e+01 | 2.3e+01 | 5.9e+01 | 3e-12 | 4.0e+01 | 4.2e+01 | 283 |
| fr | 2000_07 | 1eww:A | 1.9 | 1.2 | -1.215104e+01 | -5.691187e+00 | 5.6e+00 | 1.0e+01 | 5.6e+01 | 0.43 | 1.8e+01 | 2.1e+01 | 90 |
| fr | 2000_07 | 1exk:A | 1.6 | 1.2 | -1.000372e+01 | -7.464645e+00 | 2.5e+00 | 3.8e+00 | 7.7e+01 | 1.3 | 1.9e+01 | 2.5e+01 | 79 |
| fr | 2000_07 | 1exz:D | 0.7 | 0.7 | -1.696667e+01 | -4.383188e+00 | 0.0e+00 | 2.4e+00 | 2.9e+01 | 5.3 | 1.6e+01 | 2.0e+01 | 124 |
| fr | 2000_07 | 1f02:T | 2.3 | 2.3 | -1.174615e+01 | 1.315041e+01 | 6.1e+00 | 1.8e+01 | 7.9e+01 | 1.2 | 3.5e+01 | 4.4e+01 | 66 |
| fr | 2000_07 | 1f0j:A | 1.1 | 2.3 | -8.479671e+00 | -1.598384e+00 | 0.0e+00 | 0.0e+00 | 2.1e+01 | 33 | 4.3e+00 | 7.1e+00 | 351 |
| fr | 2000_07 | 1f0k:A | 6.3 | 3.5 | -6.989260e+00 | 4.634328e+00 | 5.7e-01 | 6.0e+00 | 2.5e+01 | 1.6 | 1.8e+01 | 1.9e+01 | 351 |
| fr | 2000_07 | 1f37:A | 1.8 | 2.0 | -1.566084e+01 | -4.987991e+00 | 9.2e-01 | 2.8e+00 | 3.6e+01 | 0.16 | 1.6e+01 | 2.4e+01 | 109 |
| fr | 2000_07 | 1f8x:A | 2.7 | 1.6 | 2.536302e-02 | -6.607693e-01 | 2.6e+00 | 5.1e+00 | 4.6e+01 | 0.40 | 2.4e+01 | 2.9e+01 | 156 |
| fr | 2000_07 | 1f94:A | 1.3 | 0 | -2.776364e+01 | -9.695238e+00 | 1.4e+01 | 2.1e+01 | 3.5e+01 | 61 | 1.3e+01 | 2.1e+01 | 63 |
| fr | 2000_07 | THIS_month:psum | 2.7 | 2.0 | 12.4 | 10.6 | 8.3 | 13.1 | 44.8 | 9.4 | 21.1 | 24.7 | 175.2 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |