| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| fr | 2000_06 | THIS_month:psum | 2.3 | 2.7 | 21.8 | 15.4 | 13.2 | 15.4 | 48.5 | 5.3 | 26.1 | 29.2 | 221.1 |
| fr | 2000_06 | 1d6b:A | 4.5 | 3.9 | 3.525828e+01 | 2.682585e+01 | 7.6e+01 | 7.6e+01 | 7.6e+01 | 5.7 | 7.6e+01 | 7.6e+01 | 42 |
| fr | 2000_06 | 1dw3:A | 1.9 | 2.0 | -1.192493e+01 | -5.091234e+00 | 8.9e-01 | 2.7e+00 | 4.6e+01 | 3.2 | 1.4e+01 | 1.4e+01 | 112 |
| fr | 2000_06 | 1e0g:A | 0.3 | 1.6 | -1.526719e+01 | -1.236915e+01 | 1.0e+01 | 1.7e+01 | 8.3e+01 | 2.7 | 3.5e+01 | 4.4e+01 | 48 |
| fr | 2000_06 | 1e1d:A | 0.8 | 2.0 | -1.607316e+01 | -8.390277e-01 | 1.8e-01 | 1.8e-01 | 6.9e+00 | 9.4 | 3.1e+00 | 4.5e+00 | 553 |
| fr | 2000_06 | 1ejf:A | 2.1 | 3.1 | -6.748004e+00 | -2.279131e+00 | 4.5e+00 | 1.0e+01 | 5.5e+01 | 0.70 | 3.0e+01 | 3.3e+01 | 110 |
| fr | 2000_06 | 1ek9:C | 6.3 | 4.6 | 8.401234e+00 | 4.090051e+00 | 0.0e+00 | 2.4e-01 | 4.6e+01 | 4.6 | 1.5e+01 | 1.9e+01 | 423 |
| fr | 2000_06 | 1f1z:A | 0.8 | 2.0 | -8.700878e+00 | -2.050300e+00 | 1.2e+00 | 1.9e+00 | 2.7e+01 | 11 | 1.0e+01 | 1.4e+01 | 260 |
| fr | 2000_06 | THIS_month:psum | 2.3 | 2.7 | 21.8 | 15.4 | 13.2 | 15.4 | 48.5 | 5.3 | 26.1 | 29.2 | 221.1 |
| fr | 2004_03_05 | psum | 2.3 | 1.8 | 1.3 | 2.1 | 10.2 | 14.7 | 42.4 | 14.8 | 20.8 | 24.1 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |