Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 633 | 260 | method/index.html | ||
3D-PSSM | 458 | 210 | method/3dpssm.html | ||
BLAST | 505 | 222 | method/blast.html | ||
FUGUE | 538 | 228 | method/fugue.html | ||
Libellula | 134 | 72 | method/libellula.html | ||
Prospect | 143 | 70 | method/prospect.html | ||
PSI-BLAST | 517 | 226 | method/psiblast.html | ||
SAMt99 | 210 | 129 | method/samt99.html | ||
ssearch | 506 | 220 | method/ssearch.html | ||
Superfamily | 285 | 123 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 15 | 1 | 3D-PSSM | 10 | 8.2 (+/-1.3) | 5 | 3.5 (+/-0.3) | 10 | 3.4 (+/-2.8) | 11 | 8.4 (+/-1.9) | 30.4 (+/-6.8) | 40.6 (+/-7.6) | 46.5 (+/-5.7) | 51.9 (+/-5.9) | 87.1 (+/-2.7) | ||||||||||||||||||||||
BLAST | 0 | 2.1 (+/-0.2) | 0 | 2.6 (+/-0.1) | 2 | -8.9 (+/-2.2) | 3 | -0.3 (+/-0.9) | 10.2 (+/-4.4) | 14.6 (+/-5.3) | 22.8 (+/-4.2) | 26.9 (+/-4.7) | 52.5 (+/-9.8) | |||||||||||||||||||||||||
FUGUE | 12 | 9.1 (+/-1.2) | 7 | 4.0 (+/-0.3) | 10 | 4.8 (+/-2.7) | 13 | 9.0 (+/-1.9) | 30.5 (+/-7.0) | 40.0 (+/-8.2) | 53.1 (+/-5.0) | 57.7 (+/-4.9) | 93.6 (+/-1.8) | |||||||||||||||||||||||||
Libellula | 9 | 8.5 (+/-1.5) | 5 | 3.3 (+/-0.3) | 8 | 5.2 (+/-3.8) | 11 | 6.0 (+/-2.3) | 24.2 (+/-5.8) | 35.2 (+/-7.4) | 45.5 (+/-5.3) | 51.7 (+/-5.3) | 92.9 (+/-2.3) | |||||||||||||||||||||||||
Prospect | 9 | 8.0 (+/-1.4) | 6 | 3.4 (+/-0.3) | 9 | 6.1 (+/-3.3) | 12 | 6.5 (+/-2.4) | 19.7 (+/-5.6) | 30.2 (+/-6.4) | 44.7 (+/-4.8) | 49.9 (+/-5.1) | 95.9 (+/-1.1) | |||||||||||||||||||||||||
PSI-BLAST | 4 | 4.0 (+/-0.9) | 2 | 3.0 (+/-0.2) | 4 | -4.9 (+/-3.7) | 3 | 1.2 (+/-2.1) | 14.3 (+/-4.6) | 20.1 (+/-5.5) | 28.8 (+/-5.5) | 31.4 (+/-5.7) | 50.3 (+/-8.3) | |||||||||||||||||||||||||
SAMt99 | 7 | 5.7 (+/-1.3) | 4 | 3.0 (+/-0.3) | 6 | 2.3 (+/-4.5) | 10 | 7.1 (+/-2.1) | 27.9 (+/-7.2) | 34.3 (+/-8.0) | 37.8 (+/-6.5) | 41.1 (+/-6.6) | 58.9 (+/-7.2) | |||||||||||||||||||||||||
ssearch | 2 | 3.2 (+/-0.7) | 2 | 3.0 (+/-0.2) | 3 | -2.8 (+/-1.6) | 8 | 2.3 (+/-0.9) | 10.5 (+/-5.4) | 16.4 (+/-6.6) | 32.4 (+/-5.1) | 38.9 (+/-5.2) | 101.7 (+/-8.7) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 60 | 1 | 3D-PSSM | 41 | 9.4 (+/-0.9) | 26 | 3.6 (+/-0.1) | 23 | 0.4 (+/-1.4) | 43 | 9.0 (+/-1.3) | 34.5 (+/-4.0) | 42.5 (+/-4.3) | 49.2 (+/-3.4) | 54.3 (+/-3.5) | 86.2 (+/-1.7) | ||||||||||||||||||||||
BLAST | 18 | 3.8 (+/-0.4) | 12 | 2.8 (+/-0.1) | 12 | -6.2 (+/-1.9) | 29 | 2.9 (+/-1.2) | 20.4 (+/-3.6) | 24.8 (+/-3.9) | 28.3 (+/-3.3) | 32.4 (+/-3.5) | 46.4 (+/-3.5) | |||||||||||||||||||||||||
FUGUE | 40 | 8.7 (+/-0.9) | 28 | 3.8 (+/-0.1) | 24 | 0.9 (+/-1.2) | 49 | 9.7 (+/-1.2) | 33.6 (+/-4.2) | 42.4 (+/-4.5) | 50.2 (+/-3.3) | 55.4 (+/-3.4) | 94.3 (+/-1.5) | |||||||||||||||||||||||||
PSI-BLAST | 19 | 5.0 (+/-0.6) | 10 | 2.8 (+/-0.2) | 10 | -7.4 (+/-1.7) | 25 | 2.3 (+/-1.2) | 19.5 (+/-3.3) | 24.9 (+/-3.6) | 29.4 (+/-3.3) | 32.7 (+/-3.4) | 47.8 (+/-3.7) | |||||||||||||||||||||||||
SAMt99 | 37 | 7.6 (+/-0.8) | 24 | 3.6 (+/-0.2) | 18 | -0.9 (+/-1.7) | 43 | 9.2 (+/-1.4) | 33.7 (+/-4.3) | 40.1 (+/-4.6) | 46.0 (+/-3.8) | 50.5 (+/-3.9) | 70.4 (+/-3.9) | |||||||||||||||||||||||||
ssearch | 25 | 5.8 (+/-0.8) | 19 | 3.2 (+/-0.1) | 15 | -0.7 (+/-1.3) | 30 | 5.2 (+/-1.3) | 21.8 (+/-4.0) | 28.5 (+/-4.4) | 39.4 (+/-3.6) | 44.8 (+/-3.7) | 91.3 (+/-1.5) | |||||||||||||||||||||||||
Superfamily | 29 | 6.2 (+/-0.7) | 16 | 3.2 (+/-0.1) | 13 | -1.4 (+/-1.3) | 35 | 5.4 (+/-1.3) | 27.6 (+/-4.1) | 33.6 (+/-4.4) | 38.7 (+/-3.6) | 43.2 (+/-3.8) | 85.3 (+/-1.1) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 126 | 1 | 3D-PSSM | 91 | 9.3 (+/-0.6) | 53 | 3.6 (+/-0.1) | 58 | 2.3 (+/-0.9) | 97 | 9.4 (+/-0.8) | 30.1 (+/-2.6) | 38.9 (+/-2.8) | 48.6 (+/-2.2) | 54.2 (+/-2.2) | 86.9 (+/-1.1) | ||||||||||||||||||||||
BLAST | 26 | 3.2 (+/-0.2) | 14 | 2.6 (+/-0.1) | 23 | -6.4 (+/-1.2) | 44 | 1.8 (+/-0.7) | 15.4 (+/-2.3) | 19.3 (+/-2.4) | 25.0 (+/-2.1) | 28.6 (+/-2.2) | 45.5 (+/-2.5) | |||||||||||||||||||||||||
FUGUE | 90 | 8.8 (+/-0.5) | 64 | 3.9 (+/-0.1) | 59 | 2.7 (+/-0.8) | 103 | 10.2 (+/-0.8) | 29.0 (+/-2.8) | 37.5 (+/-3.0) | 50.7 (+/-2.2) | 56.2 (+/-2.2) | 95.6 (+/-0.8) | |||||||||||||||||||||||||
PSI-BLAST | 45 | 5.0 (+/-0.4) | 25 | 2.8 (+/-0.1) | 26 | -5.7 (+/-1.3) | 49 | 3.0 (+/-0.9) | 19.0 (+/-2.3) | 23.9 (+/-2.5) | 29.2 (+/-2.3) | 32.2 (+/-2.4) | 47.3 (+/-2.5) | |||||||||||||||||||||||||
SAMt99 | 77 | 7.2 (+/-0.5) | 45 | 3.3 (+/-0.1) | 44 | 0.7 (+/-1.2) | 84 | 8.0 (+/-0.9) | 28.9 (+/-2.8) | 34.9 (+/-3.0) | 42.0 (+/-2.5) | 46.7 (+/-2.6) | 69.5 (+/-2.5) | |||||||||||||||||||||||||
ssearch | 45 | 4.8 (+/-0.4) | 31 | 3.0 (+/-0.1) | 30 | -0.1 (+/-0.8) | 61 | 5.3 (+/-0.9) | 18.5 (+/-2.6) | 24.2 (+/-2.9) | 36.6 (+/-2.4) | 42.2 (+/-2.4) | 91.6 (+/-1.5) |