Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 568 | 229 | method/index.html | ||
3D-PSSM | 381 | 176 | method/3dpssm.html | ||
BLAST | 551 | 224 | method/blast.html | ||
FUGUE | 460 | 193 | method/fugue.html | ||
Libellula | 72 | 42 | method/libellula.html | ||
Prospect | 104 | 49 | method/prospect.html | ||
PSI-BLAST | 557 | 228 | method/psiblast.html | ||
SAMt99 | 182 | 107 | method/samt99.html | ||
ssearch | 547 | 225 | method/ssearch.html | ||
Superfamily | 210 | 88 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 18 | 1 | 3D-PSSM | 8 | 5.1 (+/-1.1) | 3 | 2.5 (+/-0.3) | 6 | 0.2 (+/-2.2) | 9 | 3.7 (+/-2.2) | 13.5 (+/-5.3) | 20.1 (+/-6.2) | 30.6 (+/-5.2) | 35.6 (+/-5.1) | 71.9 (+/-3.9) | ||||||||||||||||||||||
BLAST | 0 | 1.5 (+/-0.2) | 0 | 1.8 (+/-0.2) | 1 | -12.3 (+/-2.3) | 2 | -0.0 (+/-1.8) | 5.8 (+/-4.0) | 7.3 (+/-4.2) | 14.8 (+/-3.8) | 18.3 (+/-3.8) | 34.3 (+/-5.0) | |||||||||||||||||||||||||
FUGUE | 7 | 5.8 (+/-1.3) | 5 | 3.1 (+/-0.4) | 9 | -0.5 (+/-3.3) | 10 | 5.6 (+/-2.6) | 12.8 (+/-5.7) | 17.1 (+/-6.0) | 33.9 (+/-5.9) | 38.2 (+/-6.1) | 69.9 (+/-7.6) | |||||||||||||||||||||||||
Libellula | 7 | 5.3 (+/-1.1) | 3 | 2.0 (+/-0.4) | 5 | -0.3 (+/-1.8) | 9 | 4.4 (+/-2.2) | 11.9 (+/-4.9) | 18.1 (+/-5.9) | 22.3 (+/-5.2) | 25.8 (+/-5.6) | 80.8 (+/-5.5) | |||||||||||||||||||||||||
Prospect | 9 | 6.1 (+/-1.3) | 5 | 2.7 (+/-0.3) | 8 | 2.8 (+/-2.6) | 7 | 4.5 (+/-2.0) | 14.8 (+/-5.1) | 22.8 (+/-6.0) | 33.6 (+/-5.9) | 38.6 (+/-5.9) | 79.9 (+/-4.1) | |||||||||||||||||||||||||
PSI-BLAST | 0 | 1.8 (+/-0.2) | 0 | 1.9 (+/-0.2) | 1 | -10.3 (+/-2.2) | 1 | 0.0 (+/-1.8) | 6.6 (+/-4.2) | 9.7 (+/-4.2) | 14.6 (+/-3.9) | 17.7 (+/-3.9) | 32.2 (+/-4.9) | |||||||||||||||||||||||||
SAMt99 | 7 | 4.7 (+/-1.1) | 4 | 2.9 (+/-0.3) | 7 | 1.5 (+/-3.7) | 8 | 5.7 (+/-2.3) | 14.1 (+/-4.3) | 19.1 (+/-5.3) | 28.0 (+/-5.5) | 31.2 (+/-5.5) | 45.3 (+/-5.5) | |||||||||||||||||||||||||
ssearch | 1 | 2.3 (+/-0.8) | 1 | 1.8 (+/-0.3) | 0 | -4.7 (+/-1.0) | 4 | 0.5 (+/-1.8) | 5.4 (+/-4.4) | 7.0 (+/-4.3) | 20.6 (+/-4.2) | 26.1 (+/-4.1) | 80.4 (+/-3.9) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 44 | 1 | 3D-PSSM | 27 | 8.1 (+/-1.1) | 11 | 3.0 (+/-0.2) | 10 | -2.2 (+/-1.7) | 27 | 6.2 (+/-1.7) | 27.1 (+/-4.4) | 34.6 (+/-4.9) | 41.4 (+/-4.0) | 47.8 (+/-4.1) | 79.3 (+/-2.6) | ||||||||||||||||||||||
BLAST | 11 | 3.3 (+/-0.4) | 5 | 2.3 (+/-0.2) | 9 | -7.4 (+/-2.3) | 16 | 2.2 (+/-1.5) | 18.4 (+/-4.2) | 23.6 (+/-4.6) | 25.4 (+/-3.8) | 29.2 (+/-4.1) | 42.1 (+/-4.2) | |||||||||||||||||||||||||
FUGUE | 20 | 6.6 (+/-1.0) | 13 | 3.1 (+/-0.2) | 10 | -1.9 (+/-1.6) | 25 | 6.0 (+/-1.7) | 24.0 (+/-4.6) | 31.1 (+/-5.0) | 40.7 (+/-4.1) | 46.1 (+/-4.0) | 78.5 (+/-3.6) | |||||||||||||||||||||||||
PSI-BLAST | 12 | 3.3 (+/-0.5) | 4 | 2.3 (+/-0.2) | 3 | -13.2 (+/-1.8) | 13 | 0.5 (+/-1.4) | 16.8 (+/-3.6) | 22.5 (+/-4.0) | 23.7 (+/-3.5) | 26.6 (+/-3.8) | 38.0 (+/-4.0) | |||||||||||||||||||||||||
SAMt99 | 23 | 5.7 (+/-0.7) | 9 | 2.9 (+/-0.2) | 10 | -5.0 (+/-1.9) | 26 | 5.5 (+/-1.6) | 22.8 (+/-4.3) | 29.4 (+/-4.9) | 37.9 (+/-4.1) | 42.5 (+/-4.4) | 60.3 (+/-4.7) | |||||||||||||||||||||||||
ssearch | 15 | 5.0 (+/-1.0) | 9 | 2.6 (+/-0.2) | 6 | -4.2 (+/-1.3) | 17 | 3.3 (+/-1.7) | 17.3 (+/-4.3) | 23.0 (+/-4.9) | 34.7 (+/-4.1) | 40.5 (+/-4.2) | 81.4 (+/-3.3) | |||||||||||||||||||||||||
Superfamily | 21 | 5.5 (+/-0.8) | 9 | 2.8 (+/-0.2) | 9 | -7.2 (+/-2.2) | 24 | 4.1 (+/-1.5) | 22.4 (+/-4.5) | 29.0 (+/-5.0) | 34.6 (+/-4.2) | 39.2 (+/-4.5) | 55.3 (+/-4.5) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 127 | 1 | 3D-PSSM | 67 | 6.6 (+/-0.5) | 29 | 2.8 (+/-0.1) | 35 | -0.6 (+/-0.9) | 70 | 4.9 (+/-0.9) | 20.8 (+/-2.4) | 27.9 (+/-2.7) | 37.9 (+/-2.3) | 43.9 (+/-2.3) | 76.7 (+/-1.5) | ||||||||||||||||||||||
BLAST | 20 | 2.5 (+/-0.2) | 8 | 2.0 (+/-0.1) | 21 | -8.2 (+/-1.2) | 30 | 0.8 (+/-0.8) | 13.3 (+/-2.2) | 16.9 (+/-2.4) | 21.4 (+/-2.1) | 25.0 (+/-2.2) | 40.3 (+/-2.3) | |||||||||||||||||||||||||
FUGUE | 57 | 6.0 (+/-0.5) | 40 | 3.0 (+/-0.1) | 37 | -1.5 (+/-1.2) | 67 | 5.4 (+/-0.9) | 19.7 (+/-2.5) | 25.9 (+/-2.8) | 38.1 (+/-2.3) | 43.3 (+/-2.4) | 77.0 (+/-2.2) | |||||||||||||||||||||||||
PSI-BLAST | 19 | 2.5 (+/-0.2) | 6 | 2.0 (+/-0.1) | 11 | -12.6 (+/-1.2) | 26 | -0.6 (+/-0.7) | 11.6 (+/-1.9) | 15.6 (+/-2.0) | 18.9 (+/-1.9) | 21.8 (+/-2.0) | 35.0 (+/-2.1) | |||||||||||||||||||||||||
SAMt99 | 63 | 5.4 (+/-0.4) | 27 | 2.8 (+/-0.1) | 39 | -1.8 (+/-1.1) | 68 | 5.0 (+/-0.9) | 21.5 (+/-2.5) | 27.0 (+/-2.8) | 35.1 (+/-2.4) | 39.3 (+/-2.5) | 58.7 (+/-2.6) | |||||||||||||||||||||||||
ssearch | 33 | 3.7 (+/-0.4) | 19 | 2.3 (+/-0.1) | 19 | -2.1 (+/-0.7) | 40 | 2.2 (+/-0.8) | 13.2 (+/-2.3) | 17.4 (+/-2.6) | 29.7 (+/-2.3) | 35.3 (+/-2.3) | 81.2 (+/-1.8) |