Method | Nprot | Nweek | Detailed results for method | ||
---|---|---|---|---|---|
ALL | 835 | 266 | method/index.html | ||
3D-PSSM | 548 | 200 | method/3dpssm.html | ||
BLAST | 812 | 262 | method/blast.html | ||
FUGUE | 649 | 214 | method/fugue.html | ||
Libellula | 81 | 39 | method/libellula.html | ||
Prospect | 130 | 47 | method/prospect.html | ||
PSI-BLAST | 302 | 132 | method/psiblast.html | ||
SAMt99 | 354 | 151 | method/samt99.html | ||
ssearch | 563 | 200 | method/ssearch.html | ||
Superfamily | 306 | 101 | method/superfamily.html |
Set 1 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 1 | 15 | 1 | 3D-PSSM | 11 | 9.4 (+/-1.7) | 6 | 3.3 (+/-0.4) | 6 | 3.4 (+/-2.6) | 11 | 8.2 (+/-2.4) | 23.4 (+/-6.9) | 31.5 (+/-8.3) | 40.2 (+/-7.5) | 45.7 (+/-7.4) | 78.5 (+/-4.9) | ||||||||||||||||||||||
BLAST | 5 | 4.5 (+/-1.3) | 4 | 2.4 (+/-0.4) | 3 | -5.8 (+/-4.8) | 5 | 2.7 (+/-1.9) | 13.6 (+/-5.7) | 16.0 (+/-6.2) | 22.0 (+/-5.9) | 25.2 (+/-6.2) | 35.8 (+/-6.1) | |||||||||||||||||||||||||
FUGUE | 10 | 9.8 (+/-1.7) | 7 | 3.5 (+/-0.4) | 8 | 1.0 (+/-3.7) | 13 | 8.9 (+/-1.9) | 21.7 (+/-6.1) | 29.3 (+/-7.1) | 43.3 (+/-6.7) | 48.6 (+/-7.1) | 70.1 (+/-8.3) | |||||||||||||||||||||||||
Libellula | 10 | 9.7 (+/-1.9) | 4 | 2.3 (+/-0.5) | 9 | 7.2 (+/-2.8) | 9 | 8.2 (+/-2.6) | 23.1 (+/-7.0) | 30.3 (+/-8.2) | 31.3 (+/-8.2) | 35.6 (+/-8.7) | 81.7 (+/-6.4) | |||||||||||||||||||||||||
Prospect | 10 | 9.0 (+/-1.7) | 6 | 3.2 (+/-0.4) | 6 | 3.3 (+/-2.3) | 9 | 7.8 (+/-2.4) | 25.7 (+/-7.5) | 33.5 (+/-8.5) | 42.6 (+/-7.4) | 46.8 (+/-7.6) | 84.5 (+/-3.0) | |||||||||||||||||||||||||
PSI-BLAST | 6 | 6.6 (+/-1.8) | 6 | 2.9 (+/-0.4) | 3 | -2.1 (+/-3.9) | 7 | 5.9 (+/-2.4) | 16.9 (+/-5.9) | 21.9 (+/-6.7) | 27.2 (+/-7.0) | 29.7 (+/-7.3) | 44.7 (+/-8.4) | |||||||||||||||||||||||||
SAMt99 | 11 | 10.0 (+/-1.8) | 7 | 3.7 (+/-0.4) | 8 | 2.0 (+/-2.5) | 9 | 7.3 (+/-2.2) | 24.0 (+/-7.1) | 32.4 (+/-8.3) | 38.9 (+/-6.9) | 44.4 (+/-7.4) | 62.0 (+/-8.0) | |||||||||||||||||||||||||
ssearch | 7 | 7.7 (+/-1.8) | 7 | 3.1 (+/-0.4) | 3 | 0.3 (+/-1.9) | 8 | 5.7 (+/-2.3) | 18.0 (+/-6.8) | 23.4 (+/-7.9) | 37.3 (+/-7.4) | 42.8 (+/-7.3) | 84.4 (+/-4.0) |
Set 2 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 2 | 10 | 1 | 3D-PSSM | 7 | 10.9 (+/-2.9) | 4 | 3.3 (+/-0.5) | 2 | -0.2 (+/-2.1) | 7 | 8.1 (+/-2.0) | 23.1 (+/-5.8) | 30.0 (+/-6.6) | 40.5 (+/-6.4) | 45.6 (+/-6.6) | 76.0 (+/-5.1) | ||||||||||||||||||||||
BLAST | 5 | 6.9 (+/-2.1) | 2 | 2.4 (+/-0.4) | 3 | -3.3 (+/-5.0) | 6 | 4.6 (+/-2.3) | 14.6 (+/-5.7) | 19.3 (+/-6.2) | 23.8 (+/-5.9) | 27.8 (+/-6.6) | 38.8 (+/-7.6) | |||||||||||||||||||||||||
FUGUE | 6 | 11.1 (+/-2.9) | 6 | 3.7 (+/-0.5) | 2 | 2.3 (+/-3.5) | 6 | 7.9 (+/-2.4) | 23.2 (+/-6.8) | 30.1 (+/-7.6) | 39.0 (+/-6.8) | 43.7 (+/-6.7) | 78.5 (+/-5.6) | |||||||||||||||||||||||||
PSI-BLAST | 6 | 10.6 (+/-3.2) | 3 | 2.9 (+/-0.6) | 2 | -4.8 (+/-3.3) | 6 | 4.6 (+/-2.0) | 15.5 (+/-4.6) | 23.3 (+/-6.2) | 30.4 (+/-5.7) | 35.6 (+/-6.6) | 52.0 (+/-8.6) | |||||||||||||||||||||||||
SAMt99 | 7 | 10.2 (+/-2.8) | 2 | 3.1 (+/-0.4) | 2 | -1.5 (+/-2.6) | 7 | 6.2 (+/-2.2) | 14.9 (+/-4.8) | 21.7 (+/-6.1) | 36.3 (+/-6.4) | 40.9 (+/-6.8) | 67.3 (+/-7.7) | |||||||||||||||||||||||||
ssearch | 5 | 9.4 (+/-3.2) | 4 | 2.9 (+/-0.5) | 2 | -0.6 (+/-2.2) | 5 | 5.2 (+/-2.2) | 9.7 (+/-4.1) | 15.0 (+/-5.3) | 33.3 (+/-6.9) | 40.0 (+/-7.2) | 84.6 (+/-4.6) | |||||||||||||||||||||||||
Superfamily | 7 | 9.7 (+/-2.6) | 5 | 3.5 (+/-0.4) | 2 | -0.8 (+/-3.6) | 6 | 6.9 (+/-2.2) | 17.2 (+/-6.5) | 21.3 (+/-7.4) | 34.2 (+/-6.4) | 38.2 (+/-6.6) | 59.7 (+/-7.4) |
Set 3 | Sorted alphabetically for identical ranks! | FEWER SCORES | ||||||||||||||||||||||||||||||||||||
subset | nprot | rank | Method | Sgnf(-lnP_MMT) | -lnP_MMT | Sgnf(Z_CE) | Z_CE | Sgnf(Q_LG1) | Q_LG1 | Sgnf(Q_LG2) | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | N3.5A_ext_CE% | N5A_ext_CE% | ModN% | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
common 3 | 47 | 1 | 3D-PSSM | 31 | 9.0 (+/-1.0) | 18 | 3.3 (+/-0.2) | 17 | 2.9 (+/-1.6) | 34 | 8.6 (+/-1.3) | 28.8 (+/-4.2) | 36.3 (+/-4.6) | 45.4 (+/-3.9) | 51.1 (+/-4.0) | 79.2 (+/-2.8) | ||||||||||||||||||||||
BLAST | 17 | 5.2 (+/-0.8) | 10 | 2.5 (+/-0.2) | 15 | -2.3 (+/-2.7) | 21 | 3.9 (+/-1.2) | 19.8 (+/-3.9) | 23.3 (+/-4.2) | 28.1 (+/-3.8) | 31.3 (+/-3.9) | 44.2 (+/-3.8) | |||||||||||||||||||||||||
FUGUE | 28 | 8.5 (+/-1.0) | 22 | 3.5 (+/-0.2) | 22 | 2.1 (+/-2.4) | 34 | 8.2 (+/-1.2) | 26.2 (+/-4.2) | 33.5 (+/-4.6) | 44.0 (+/-3.8) | 49.0 (+/-4.0) | 77.2 (+/-3.8) | |||||||||||||||||||||||||
PSI-BLAST | 20 | 7.3 (+/-1.1) | 15 | 2.9 (+/-0.2) | 13 | -3.8 (+/-2.7) | 25 | 5.4 (+/-1.4) | 22.8 (+/-3.9) | 29.1 (+/-4.3) | 33.3 (+/-4.1) | 36.6 (+/-4.3) | 51.1 (+/-4.4) | |||||||||||||||||||||||||
SAMt99 | 31 | 9.2 (+/-1.0) | 18 | 3.5 (+/-0.2) | 21 | 1.9 (+/-1.8) | 32 | 7.6 (+/-1.2) | 28.2 (+/-4.2) | 36.6 (+/-4.7) | 43.9 (+/-3.8) | 48.8 (+/-4.0) | 69.1 (+/-3.9) | |||||||||||||||||||||||||
ssearch | 24 | 7.5 (+/-1.1) | 19 | 3.0 (+/-0.2) | 15 | 1.7 (+/-1.4) | 25 | 5.7 (+/-1.4) | 19.6 (+/-4.1) | 25.9 (+/-4.5) | 40.4 (+/-4.0) | 46.1 (+/-4.0) | 86.0 (+/-2.2) |