EVA: Detailed information for proteins added on: 2001_05_16

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2001_05_16	1ezv	G	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE/ELECTRON TRANSPORT	MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I; CHAIN: A; FRAGMENT: RESIDUES 24-457; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2; CHAIN: B; FRAGMENT: RESIDUES 17-368; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: CYTOCHROME B; CHAIN: C; ENGINEERED: YES; MOLECULE: CYTOCHROME C1; CHAIN: D; FRAGMENT: RESIDUES 62-306; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT; CHAIN: E; FRAGMENT: RESIDUES 31-215; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN; CHAIN: H; FRAGMENT: RESIDUES 74-147; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN; CHAIN: F; FRAGMENT: RESIDUES 3-127; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C; CHAIN: G; FRAGMENT: RESIDUES 2-94; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN; CHAIN: I; FRAGMENT: RESIDUES 4-58; EC: 1.10.2.2; ENGINEERED: YES; MOLECULE: HEAVY CHAIN (VH) OF FV-FRAGMENT; CHAIN: X; ENGINEERED: YES; MOLECULE: LIGHT CHAIN (VL) OF FV-FRAGMENT; CHAIN: Y; ENGINEERED: YES	SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; SACCHAROMYCES CEREVISIAE; YEAST; ORGANELLE: MITOCHONDRIA; MUS MUSCULUS; MOUSE; MUS MUSCULUS; MOUSE;	C.HUNTE,J.KOEPKE,C.LANGE,T.ROSSMANITH,H.MICHEL	1ezv	2001_05_16
2001_05_16	1ihn	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL GENOMICS, UNKNOWN FUNCTION	MOLECULE: HYPOTHETICAL PROTEIN MTH938; CHAIN: A, B; ENGINEERED: YES	METHANOBACTERIUM THERMOAUTOTROPHICUM; ARCHAEA;	K.DAS,G.MONTELIONE,E.ARNOLD	1ihn	2001_05_16

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field