EVA results for 1ly1:A

DATE : 2002_07_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15.
seq	MKKIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGLPVY
dssp	--EEEEEE------HHHHHHHHHHH---EEEE-HHHHHHHH-----HHH----HHHHHHHHHHHHHHHHHHH-------EEEE------HHHHHHHHHHHHHH--EEEEEE----HHHHHHHH---HHH---HHHHHHHHHHHHHHH-----
apssp	---EEEEEE-------HHHHHHHH-----EE-----HHHHHEHHHHHHHHHH-------EEE-EHHHHHHHHH-----EEEEEE-----HHHHHHHHHHHHHH--EEEEEEEE--HHHHHH-----------HHHHHHHHHHHHHH------	-3.0	+8.9	-0.07
apssp2	--EEEEEEE-----HHHHHHHH------EEEEE----EEEEEE---HHHH-HHHHHHHHHH---HHHHHHHHH------EEEEE-----HHHHHHHHHHHHH---EEEEEE----HHHHHHHH---------HHHHHHHHHHHHHHH-----	-1.2	+0.1	-0.04
jpred	---EEEEE-------HHHHHHHHHH----EEE--HHHHHHHH-------------------HHHHHHHHHHHHH------EEEE-----HHHHHHHHHHHHH----EEEEEE---HHHHHHHHHH---------HHHHHHHHHHH-------	+5.0	+16.9	+0.11
phd	--EEEEEE------HHHHHHHHHHHH---EEEE---HHHHHH--------------HHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHH----EEEEEE---HHHHHHHHHH-------HHHHHHHHHHHHHH------	+12.6	+21.1	+0.24
phdpsi	--EEEEEE------HHHHHHHHHHHH---EEEE---HHHHHH--------------HHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHH----EEEEEE---HHHHHHHHHH-------HHHHHHHHHHHHHH------	+9.1	+18.1	+0.19
prof_king	--EEEEEE--------HHHHHHHHH----EEEE--EEHHHEE-------HHH----HHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHH----EEEEEEE---HHHHHHHHH--------HHHHHHHHHHHHH-------	+5.0	+16.8	+0.10
profsec	--EEEEEE------HHHHHHHHHHH----EEEE----EE-EEE-----------------HHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHH----EEEEEEE--HHHHHHHHH--------HHHHHHHHHHHHHH------	+0.8	+8.4	+0.05
prospect_secstruc	--EEEEEE------HHHHHHHHHH-----EEEE--HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHH---EEEEEEE---HHHHHHHHHH-------HHHHHHHHHHHHHH------	+13.2	+21.8	+0.22
psipred	-EEEEEEE------HHHHHHHHHHH----EEE-HHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHH------EEEEE-----HHHHHHHHHHHHH---EEEEEEEE--HHHHHHHHHH-------HHHHHHHHHHHHHH------	+10.8	+14.9	+0.21
samt99_sec	--EEEEEE------HHHHHHHHHHH----EEE-HHHHHHHHHHH-HH-HHHHH------HHHHHHHHHHHHHHH-----EEEE------HHHHHHHHHHHHHH---EEEEEE---HHHHHHHHHHH------HHHHHHHHHHHH------HH	+4.0	+15.4	+0.10
sspro2	--EEEEEEE-----HHHHHHHHHH-----EEE-----EEEEE----------------H-----HHHHHHHHH-------EEEE-----HHHHHHHHHHHHHH--EEEEEEE---HHHHHHHH---------HHHHHHHHHHHHHHH-----	+1.9	-1.3	+0.08
prospect	--EEEEEE------HHHHHHHHHH-----EEEE--HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEE-----HHHHHHHHHHHHH---EEEEEEE---HHHHHHHHHH-------HHHHHHHHHHHHHH------	+13.1	+22	+0.22

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva