EVA results for 1k0h:A

DATE : 2002_07_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,..
seq	MADFDNLFDAAIARADETIRGYMGTSATITSGEQSGAVIRGVFDDPENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWVDRVSPDDGGSCHLWLGRGVPPAVNRRR
dssp	-------------------------EEEEE------EEEEEEEE-------------------EEEE------------EEEE----EEE-------------EE------------
apssp	--HHH-HHHHHHHHHHHHHHHH---EEEEE------EEEE-EE------EE----EEEE-----EEEE-HHEHHH-----EEE----EEEEEE-------EEEEE------------	-12.6	-31.5	-0.12
apssp2	---HHHHHHHHHHH--HHHHEEE---EEEE-------EEEEE-------------EEEE----EEEEE-HHHHHHH---EEEE---EEEEEE-------EEEEEE------------	-18.4	-33.1	-0.26
jpred	----HHHHHHHHHH---EEEEEE---EEEE-------EEEEEE------------EEEE-----EEEEE--HEE------EEE---EEEEEE--------EEEEE------------	-4.6	-17.4	-0.13
phd	-----HHHHHHHHHHHHHHHHH-EEEEEEE--EE---EEEEEE-------E----EEEE----EEEEEE----EEE---EEEE---EEEEEEE------EEEEEE------------	-5.9	-20.0	-0.01
phdpsi	-----HHHHHHHHHHHHHHHHH-EEEEEEE--EE---EEEEEE-------E----EEEE----EEEEEE----EEE---EEEE---EEEEEEE------EEEEEE------------	-9.4	-23.0	-0.06
prof_king	---HHHHHHHHHHH----EEEEE--EEEEE------EEEEEEE-------E---EEEEE----EEEEE----EE-----EEEE---EEEEEE-------EEEEEE------------	-2.7	-24.2	-0.02
profsec	---HHHHHHHHHHHHHHHHHHH--EEEEEEE------EEEEEE------------EEEE----EEEEEE-EEEEEEE--EEEE---EEEEEEEEE----EEEEEE------------	-16.0	-24.2	-0.13
prospect_secstruc	--HHHHHHHHHHH---HHHHH----EEEE--------EEEE--------------EEE-----EEEEEE---EEEE-----EE--EEEEEEEE-------EEEE-------------	-6.6	-19.7	-0.15
psipred	--HHHHHHHHHHHHHHHHHHHHH---EEEEE------EEEEEE------------EEEE----EEEEEE-HHHHH----EEEE---EEEEEEE------EEEEEE------------	-15.5	-22.6	-0.10
samt99_sec	-HHHHHHHHHHHHHHHHHHHHHH--EEEE--------EEEEE-----HH-H----EEEE----EEEEE---HHHE----EEEE---EEEEEE--------EEEEE------------	-13.1	-28.7	-0.05
sspro2	---HHHHHHHHHHH--HHHHH---EEEEEE------EEEEEE--------H----EEEE-----EEEE--HHHHH----EEEE----EEEE----------EEE-------------	-6.8	-25.6	-0.03
prospect	--HHHHHHHHHHH---HHHHH----EEEE--------EEEE--------------EEE-----EEEEEE---EEEE-----EE--EEEEEEEE-------EEEE-------------	-6.7	-19.6	-0.15

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva