EVA results for 1iu1:B

DATE : 2002_07_10
TYPE : sec
NRES : 123
HEADER : ENDOCYTOSIS/EXOCYTOSIS
COMPND : 2 MOLECULE: GAMMA1-ADAPTIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : T.NOGI, Y.SHIBA, M.KAWASAKI, T.SHIBA, N.MATSUGAKI, N.IGARASHI,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12..
seq	IAAGIPSITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSIVPAFNTGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
dssp	-------EEEEEE--EEEEEEEEE------EEEEEEEEEE-----EEEEEEEEE-----EEEE-------E-HHH---EEEEEEEE---------EEEEEEEE--EEEEEEEE-----HHH--
apssp	-------EEEEE----EEEEEE--------EEEEEEEE---------EEEHHE------EEEEE-----EEEE-----EEEEEEEE---HHHHHEEEEEEE-----HHHHHHH----------	-6.0	-2.0	-0.13
apssp2	-------EEEE-----EEEEEEEE-----EEEEEEEEE-------HHHEE-EE-----EEEEEE-----E--------EEEEEEEE------EEEEEEEEEEE---EEEEEEE----------	-3.7	+1.7	-0.15
jpred	-------EEEE-----EEEEEEE-------EEEEEEEEE------HHHEEEEEE----EEEEE---------------EEEEEEEE------EEEEEEEEEE------EEEE-----------	+6.6	+14.8	+0.07
phd	-------EEEEE---EEEEEEEE-------EEEEEEEEE----------EEEEEE---EEEEE---------------EEEEEEEE------EEEEEEEEEEE-------E------------	+7.9	+9.8	+0.07
phdpsi	-------EEEEE---EEEEEEEE-------EEEEEEEEE----------EEEEEE---EEEEE---------------EEEEEEEE------EEEEEEEEEEE-------E------------	+4.4	+6.8	+0.02
prof_king	-------EEEEE----EEEEEE-------EEEEEEEEE---------EEEEEE-----EEEEEE--------------EEEEEEE-------EEEEEEEEEE-----EEEEEEE---------	+3.4	+13.5	-0.01
profsec	-------EEEEE---EEEEEEEEE------EEEEEEEEE--------EEEEEEE---EEEEEEE--------------EEEEEEEE-----EEEEEEEEEEEE---EEEEEEEE---------	+6.9	+10.3	+0.08
prospect_secstruc	-------EEEE-----EEEEEEE------EEEEEEEEEE------HHHHHHHHHHHHH-EEEE---------------HHHHEEEE------EEEEEEEEEEE----EEE-------------	-2.5	+2.4	-0.01
psipred	-------EEEEE---EEEEEEEE------EEEEEEEEEE------HHHHHEEE-----EEEEEE--------------EEEEEEEE------EEEEEEEEEEE---EEEEEEE----------	+3.3	+8.5	+0.04
sspro2	-------EEEEE---EEEEEEEE-------EEEEEEEEE------HHHEEEEEE---EEEEEE---------------EEEEEEEE------EEEEEEEEEEE-----EEE-E----------	+5.1	+6.4	+0.06
prospect	-------EEEE-----EEEEEEE------EEEEEEEEEE------HHHHHHHHHHHHH-EEEE---------------HHHHEEEE------EEEEEEEEEEE----EEE-------------	-2.6	+2.6	-0.01

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva