EVA results for 1ifr:A

DATE : 2002_07_17
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11..
seq	GSHRTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLV
dssp	-EEEE---EEEEEE-----EEEEEE-----EE----EEEEEE-----EEEE-----EE----EEEEEE-------E---EEEE-----------EEEEEE-----EEEEEEE-
apssp	--------EEEEEE----EEEEE------------EEEEE------EEEEE---EEEE----EEEEEE-----------EEEEE---------EEEEEEE----HHHHHH---	+0.2	+3.1	-0.13
apssp2	--------EEEEEE-----EEEEEE----------EEEEEE------EEEE-----EE----EEEEEE------------EEEE----------EEEEEE-----EEEEEE--	+5.9	+5.9	0
jpred	--------EEEEEE-----EEEEE------------EEEEE-----EEEEE----EEE----EEEEEE------------EEEE----------EEEEEE------EEEE---	+11.9	+14.5	+0.10
phd	--------EEEEEE-----EEEEEE----------EEEEEE-----EEEEEE--EEEEE---EEEEEEE-----------EEE-----------EEEEEEE----EEEEEEE-	+14.0	+15.7	+0.10
phdpsi	--------EEEEEE-----EEEEEE----------EEEEEE-----EEEEEE--EEEEE---EEEEEEE-----------EEE-----------EEEEEEE----EEEEEEE-	+10.5	+12.7	+0.05
prof_king	--------EEEEEE----EEEEEE-----------EEEEEE-----EEEEE----EEEE---EEEEEEE-----------EEEEE---------EEEEEEE----EEEEEEE-	+8.6	+13.2	0.00
profsec	-------EEEEEEE-----EEEEEE----------EEEEEEE----EEEEEE---EEE----EEEEEEE-----------EEEE----------EEEEEEE----EEEEEEE-	+9.0	+10.9	+0.04
prospect_secstruc	--------EEEEEE-----EEEEEE-----------EEEEE-----EEEEEE----EE----EEEEEEE--------HHHH-EE-----------EEEEE------EEEEE--	+10.6	+16.0	+0.04
psipred	--------EEEEEE-----EEEEEE-----------EEEEEE----EEEEE-----EE----EEEEEE------------EEE-----------EEEEEE-----EEEEEEE-	+14.0	+11.1	+0.22
samt99_sec	--------EEEEEE-----EEEEE-----------EEEEEE-----EEEEEE---EEE----EEEEEE------------HEE-----------EEEEEE-----EEEEEEEE	+10.2	+11.8	+0.06
sspro2	--------EEEEEE-----EEEEEE----------EEEEEEE----EEEEE----EEE----EEEEEE------------EEEE----------EEEEEE-----EEEEEE--	+11.5	+13.1	+0.11
prospect	--------EEEEEE-----EEEEEE-----------EEEEE-----EEEEEE----EE----EEEEEEE--------HHHH-EE-----------EEEEE------EEEEE--	+10.5	+16.2	+0.04

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva