EVA results for 1gd7:A

DATE : 2001_09_26
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....
seq	MTPLEAFQILDLRVGRVLRAEPHEKARKPSYKLWVDLGPLGVKQSSAQITELYRPEDLVGRLVVCAVNLGAKRVAGFLSEVLVLGVPDEAGRVVLLAPDREVPLGGKVF
dssp	--HHHHHHH--EEEEEEEEEEE--------EEEEEE-HHH-EEEEEE-------HHHH---EEEEE-----EEE--EEE--EE-EEE-----EEEEEE--------E--
apssp	---HHHHHHHH-HHH-EEEE----------EEEEEE------EEEEEE------HHHHH--EEEEEE------E----EEEEEEE-------EEEE-------------	+4.9	+14.2	+0.05
jpred	----HHHHHHH-EEEEEEEE---------EEEEEEE------EEEEE-------HHHH---EEEEEE------E---E--EEEEE-------EEEEE------------	+4.6	+12.8	+0.08
phd	-----HHHHHHHHHHHHEEE---------EEEEEEE-----EEEEEEEEEE------EEEEEEEEEEE-----EEE---EEEEEEE-----EEEEEE---------EE-	-11.7	-9.4	-0.11
phdpsi	--------EEEEEEEEEEEE---------EEEEEEEE----EEEEEEEEE--E-EEEE--EEEEEEEEE---EEEE-E--EEEEEE-----EEEEEE------------	-9.8	-7.4	-0.14
prof_king	--------EEEEEEEEEEEE---------EEEEEEE------EEEEE---E----------EEEEEEE----EEEE---EEEEEEE-----EEEEEE---------EE-	-7.3	-5.5	-0.09
profsec	-------EEEEEEEEEEEEE----------EEEEEE-----EEEEEEE-EEEE-HHH----EEEEEEEE------EEE--EEEEEEE----EEEEEE------------	-6.8	-9.3	-0.11
psipred	---HHHHHHEEEEEEEEEEEEE-------EEEEEEEE-----EEEEE-------HHHH---EEEEEEE--HHH---EE--EEEEEE------EEEE-------------	+3.5	+10.2	+0.03
samt99_sec	---HHHHHHHEEEEEEEEEE----------EEEEEE------HEEEHHHHH---HHHHH--EEEEEE---HHHHH------EEEEE------EEEEE---------EE-	-2.8	+4.8	-0.02
sspro2	----H-HHEEEEEEEEEEEE---------HEEEEE--------EHHHHHHH---HHHHH--EEEEEEE--HHH-------EEEEEE------EEEE-------------	-11.9	-7.7	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva