EVA results for 1fi2:A

DATE : 2000_11_01
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20
seq	TDPDPLQDFCVADLDGKAVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGGS
dssp	-----------E-------------E--HHH----------------------EEEEEE-----HHH-----EEEEEEE----EEEEEE-----EEEEEEE-EEEEEEE--HHH---EEEEEEE---EEEE-----EEEEE-----EEEEEEE-------EEHHHHHHH------HHHHHHHH---HHHHHHHHHH-----
phd	-----------------------------------EEEEE-------------EEEE--------------EEEEEEE---------------EEEEEEEEEEEEEEE---------EEEEE-----EEEE---EEEEEE-------EEEEEE------EEEEEEEEE---------EEEEEEE--HHHHHHHHHH-----	+2.7	-7.9	+0.05
phdpsi	----------E--------EE-----------E--HHHH---------------EEEE-------------EEEEEEE---------------EEEEEEEEEEEEEEEEE-----HHHEEEE-----EEEEE--EEEEEE------EEEEEEEE-----EEEEEEEE--------HHHHHHHH---HHHHHHHHHHH----	+0.6	-8.7	-0.00
prof_king	-------EEEEE------EEE---------------HHH--------------EEEEEE------------EEEEEEEE--------------EEEEEEEEEEEEEEEEEE-----EEEEEEE----EEEE---EEEEEEE-----EEEEEEE------EEEEEEEEE-------HHHHHHHH---HHHHHHHHHH-----	+4.2	-2.2	+0.04
profsec	--------EEEE------EEE------------HHHHHHH--------------EEEEE---------EEEEEEEEEEE--------------EEEEEEEE--EEEEEEE------EEEEEEE----EEEEE--EEEEEEE-----EEEEEEEE-----EEEEEEEE--------HHHHHHHH---HHHHHHHHHH-----	-1.7	-5.1	-0.04
psipred	--------EE--------EEE--EE---HHH---HHHHHH--------------EEEE--HHH--------EEEEEEE----------------EEEEEEEEEEEEEEEEE-----EEEEEEE----EEEE----EEEEE-----EEEEEEEE------EEEEHHHH--------HHHHHHHH---HHHHHHHHHHH----	+0.4	-5.4	0.00
pssp	-----------------EEEEEEEE----HH---HHH----HH-----------EEEEEEE-------EEE--EEEEEE--------------HH--EEE----EEEEE-------HHHEEHHH-EEEEE-----EEE--------EEEEEEE-----EEEEEEEEEE---------HHHHHH-HH-HHHHHHHH--HH--	+1.2	-1.2	-0.03
samt99_sec	-------HHHHHHH-------------------HHHHHH---------------EEEEE-------HHHH-EEEEEEEE---------------EEEEEEE-EEEEEEE--------EEEEEE----EEEE----EEEEE------EEEEEEE-------EEE------HH----HHHHHHHH---HHHHHHHHHH-----	+1.7	+1.8	+0.08
sspro1	-------HEEEE------EEE------------HHHHHH---------------EEEE--H-----H----EEEEEEEE--------------EEEEEEEEEEEEEEEEE------EEEEEEE----EEEEE--EEEEEE------EEEEEEE-------EHHHHHHH-------HHHHHHHH---HHHHHHHHHHH----	+2.1	-1.5	+0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva