EVA results for 1d2p:A

DATE : 2000_09_27
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37..
seq	ETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDINGTTITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNNDMGNLITTNKYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDINGTTITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNNDMGNLITTNKYT
dssp	-EEEEEEEEEEE-----------EEEEEEEE--EEEEEEEEEHHH--EEEEEEEE-EE--EE--EEEEE-----EEEEEE--EEEEEE---EEEEEEEEEEE-----------EEEEEEEE--EEEEEEEEEEHHH--EEEEEEEE-E----E--EEEEE-------EEEEE------EEEEEE----EEEEEEEEEEE------------EEEEEEE--EEEEEEEE-HHH--EEEEEEEE-EE--EE--EEEEE-----EEEEEE--EEEEEE---EEEEEEEEEEE-HHH-------EEEEEEEE--EEEEEEEEEE-----EEEEEEEE-EE--EE--EEEEE------EEEEEE---HHHEEEEEEE-
phd	-------EEEE-----------EEEEEEEEE-----EEEEE---EEEEEE------------EEEEE----HHH--------EEEEE-----EEEEEEEE-------------EEEEEEEE-------EEEEE-----EEEE----------EEEEEEEEEEEE-EEEEEEE------EEEE------------EEEE-----------EEEEEEEE-----EEEEEE---EEEEEE------------EEEEE----HHH--------EEEEE-----EEEEEEEE-------------EEEEEEEE-------EEEEE-----EEEE----------EEEEEEEEEEEE-EEEEEEE------EEEEE---	-8.3	-2.7	-0.13
phdpsi	---EEEEEEEE------------EEEEEEEE----EEEEEEE----EEEEE----------EEEEEEEEEEE---------------------E------------------EEEEEEEEE-------EEEEE-----EEEEE---------EEEEEEEEEE-----EEEEE-----EEEE-----------------------------EEEEEEEE-----EEEEE------EEEEE---------EEEEEEE-------------EEE------------E-----------------EEEEEE--------EEEEE-----EEEEE---------EEEEEEEEEE-----EEEEE-------EE-----	-12.3	-13.1	-0.16
prof1	--------EEE------------EEEEEEEE----EEEEEEE------EEEEE-------------EE--------------EEEE----------------------------EEEEEEE---EEEEEEEE------EEEEE-----------EEEEEEE----------------------------------EEE--------------EEEEEE------EEEEE-----EEEE-----------EEEEEEE--------------------------EEE-----------------EEEEEE------EEEEEE----EEEEEEE--------EEEEEEEEEE------------------------	-16.6	-21.8	-0.22
prof_king	--EEE--EEEEE-----------EEEEEEEEE---EEEEEEEE------EEEE---------EEEEEEEE----EEEEE---EEEEE-----EEEEEEEEEEE-----------EEEEEEE-------EEEEEE----EEEEE---------EEEEEEEEEE----EEEEEEE----EEEEEE----EEE--EEE---------------EEEEEEEEE---EEEEEE------EEEE------------EEEEEE-----EEEEE--EEE----------EEEEEE------EE-E---EEEEEEE--------EEEEE----EEEEE----------EEEEEEEEEE-----EEEEE-----EEEEE----	-3.8	+1.8	-0.16
psipred	--------EEEE------------EEEEEEE---EEEEEEE-------EEE-----------EEEEEEEE-----------------------EEEEEE--------------EEEEEEE---EE---EEEEEE---EEEE-----------EEEEEEEEE-----EEEEEE------EE-------------------------------EEEEEE----EEEEEEE-----EEEE-----------EEEEEEEEE-----EE------------------EEEE-----EE---EE--EEEEEEEE-------EEEEE-----EEEE------------EEEEEEE-------------EEEEEEEE----	-14.7	-15.8	-0.26
pssp	-EEEEEEEEEEE-----------EEEEEEE-----EEEEEEE-----HH------------EEEEEEEE-----EEEE---EEEEEEEE---EEEEEEE--------------EEEEEE---------EEEE-----EEEEE---HHHHH---EEEHHHEE-EEEEEEEE--------EEEEEEE---EEEEEEEEEEE-----------EEEEEEE-----EEEEEEE-----HH------------EEEEEEEE-----EEEE---EEEEEEEE---EEEEEEE--------------EEEEEE---------EEEE-----EEEEE---HHHHH---EEEHHHEE-EEEEEEEE-------EEEEE----	+1.2	+9.1	-0.03
samt99_sec	----EEEEEEE------------HEEEEEHH---EE--EEE------HHHH-----------EEEEEEEE-------EE--EEE-------HHHHEE--EE-------------EEEEEEE--------EEEEE-----EEE----------EEEEEEEEEE-----EEE-------------------------EEE-------------EEEEEE----EEEEEEE-----EEEEE----------EEEEEEEEEEE----------EE------------EE----------------EEEEEE--------EEEE------EEEE-----------EE-------------EEEE------EEE-----	-17.4	-17.8	-0.23
sspro	------------------------EEEEEE----EEEEEEEE-----EEEE-----------EEEEE---------E-----EE-----------EEEEE--------------EEEEEEE-------EEEEE-----EEEE----------EEEEEEEE------EEEE--------EEE------------------------------EEEEEE----EEEEEEE------EEE------------EEEEEE--------------EEE----------EEEEE--------------EEEEEE--------EEEEE-----EEEE----------EEEEEEEEE-----EEEEE------EEEEE----	-12.7	-11.3	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : abbreviation of prediction method (seq=sequence)
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: May 30, 2001
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva