EVA results for 1ekr:A

DATE : 2000_09_20
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14..
seq	GEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSSGDFK
dssp	-------------EEEEEEEEEEEE--HHHHHHHH--------HHHHHHHHHHHHHH-HHHH----------EEEEEEEEEHHH-EEEEEEEEEEEE----HHHHHHHHHHHHHHHHHHHHHH----EEEEEEEEEE---E--
jpred	---EEEEE-----HHHHHHHHHHHH--HHHHHHHHH-------HHHHHHHHHHHHHH----------------EEEEEE-------EEEEEEEE------EEEHHHHHHHHHHHHHHHHHHHH--------EEEEE-------	-2.9	+2.4	0.00
phd	--EEEEE-----HHHHHHHHHHEEEHHHHHHHHHHH-------HHHHHHHHHHHH---HHH--------EEEEE-EEE--------EEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHH----EEEEEEEEEE------	+2.7	+5.3	+0.11
phdpsi	--EEEEE-----HHHHHHHHHHHHH--HHHHHHHHH-------HHHHHHHHHHHHHH------E------EEEEEEEEEE-----EEEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHH----EEEEEEEEEE------	+1.5	+1.1	+0.10
prof_king	--EEEEEE------HEEEEEEEEEEE-HHHHHHHHH--------EEEEHHHHHHH-----------------EEEEEEEE-----EEEEEEEEEEE---EEEEEHHHHHHHHHHHHHHHHHHH---EEEEEEEEEEE------	+2.5	+8.4	+0.07
profsec	--EEEEE------HHHHHHEEEEEE--HHHHHHHHH-------HHHHHHHHHHHHHHHHH-------------EEEEEEE------EEEEEEEE------HHHHHHHHHHHHHHHHHHHHHHH----EEEEEEEEEE------	+5.4	+9.0	+0.13
psipred	---EEEE------EEEEEEEEEEEEE-HHHHHHHH--------HHHHHHHHHHHH-----HH----------EEEEEEEE-----EEEEEEEEEE----------HHHHHHHHHHHHHHHHH-----EE--EEEEEE------	+7.7	+8.9	+0.23
pssp	----EEE----HHHHHHHHHHHHHHHHHHHHHEEE---------EEHHHHHHHHHHHH---------------HHH----------HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHH------EEEEE-------	-6.3	-3.7	-0.01
sspro1	---EEEE-------HHEEEEEEEEE--HHHHHHHHH-------HHHHHHHHHHHHH---H-H-----------EEEEEEE-----EEEEEEEEEE-----HHHHHHHHHHHHHHHHHHHHHHHH---EEE-EEEEEE------	+8.6	+9.1	+0.19

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 11, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva