Home - sec - acc - cm - fr - con - Bottom

EVA results for 1fx3:A

DATE : 2000_12_06
TYPE : sec
NRES : 143
HEADER : TRANSPORT PROTEIN
COMPND : MOL_ID: 1;
SOURCE : MOL_ID: 1;
AUTHOR : Z.XU, J.D.KNAFELS, K.YOSHINO

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14..
seq	QPVLQIQRIYVKDVSFEAPNLPHIFQQEWKPKLGFDLSTETTQVGDDLYEVVLNISVETTLEDSGDVAFICEVKQAGVFTISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPALNLSPVNFDALFVEYMNRQQAEN
dssp	--EEEEEEEEEEEEEEE---HHHH------------EEEEEEEEE--EEEEEEEEEE------------EEEEEEEEEEEEE---HHHHHHHHH-HHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHH-
eva3	---EEEEEEEEEE---------HHHHH----EEEEEE---EEE----EEEEEEEEEEEEEE-----EEEEEEEEE--EEEEE---HHHHHHHHHH-----HHHHHHHHHHHHHH-------------HHHHHHHHHHHHH---	-4.6	+2.2	+0.03
eva4	--EEEEEEEEEEE----------H--------EEEEE----------EEEEEEEEEEEEEE-----EEEEEEEEE-EEEEEE---HHHHHHHH--H--HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH---	-0.7	-0.6	+0.12
eva5	--EEEEEEEEEEE----------H--------EEEEE----------EEEEEEEEEEEEEE-----EEEEEEEEE-EEEEEE---HHHHHHHH--H---HHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH---	-2.1	-0.9	+0.04
phd	--EEEEEEEEEEE----------HHH-----EEEEEE-----------EEEEEEEEEEEEE-----EEEEEEEE---EEEEEE---HHHHHHH-----HHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH---	-1.2	+8.3	+0.15
phdpsi	--EEEEEEEEEEE---------HHH------EEEEEE--HHHHH----EEEEEEEEEEEEE-----EEEEEEEE---EEEEEE---HHHHHHE------HHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH---	-3.3	+8.7	+0.05
prof	---EEEEEEEE----E-------EEE------EEEEEE---EE----EEEEEEEEEEEEEE-----EEEEEEEE---EEEEE---HHHHHHHHHH------HHHHHHHHHHHH--------------HHHHHHHHHHHHH---	-5.6	-5.1	+0.03
psipred	---EEEEEEEEEE--------HHHHHHH---EEEEEEE--EEEE---EEEEEEEEEEEEEE-----EEEEEEEEEEEEEEEE---HHHHHHHHHHH----HHHHHHHHHHHHHH-------EE----HHHHHHHHHHHHH---	-1.5	-3.0	+0.07
pssp	---HH--EEEEE---------HHHHHH--------------HH---HHEEEEEEEEEEEEEE----EEEEE-----EEEEEE--HHHHHH--------------HHHHHHHH--------------HHHHHHHHHHHH-----	-6.2	+5.9	-0.00
sspro	--EEEEEEEEEEE-------------------E--------------EEEEEEEEEEEEEE-----EEEEEEEEE-EEEEE----HHHHHHHH--H-HHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH---	+1.4	-6.3	+0.14

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : abbreviation of prediction method (seq=sequence)
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

All results

Last update: Dec 29, 2000
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva
WWW mirrors: ../../../doc/mirrors.html

Home - sec - acc - cm - fr - con - Top