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EVA results for 1f5m:A

DATE : 2000_11_15
TYPE : sec
NRES : 176
HEADER : SIGNALING PROTEIN
COMPND : MOL_ID: 1;
SOURCE : MOL_ID: 1;
AUTHOR : Y.S.HO, L.M.BURDEN, J.H.HURLEY

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,.
seq	STGFHHADHVNYSSNLNKEEILEQLLLSYEGLSDGQVNWVCNLSNASSLIWHAYKSLAVDINWAGFYVTQASEENTLILGPFQGKVACQMIQFGKGVCGTAASTKETQIVPDVNKYPGHIACDGETKSEIVVPIISNDGKTLGVIDIDCLDYEGFDHVDKEFLEKLAKLINKSCVF
dssp	-----HHHHH-------HHHHHHHHHHHHHHHH----EHHHHHHHHHHHHHHHHHH----EEEEEEEEE------EEEEEEEEE-----EEE---HHHHHHHHH---EEE--HHH------------EEEEEEEE-----EEEEEEEEE-------HHHHHHHHHHHHHHHHH-E-
eva3	---------HH------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEEE-----EEEEE-----EEHHHHH---EEEEEE------EEEE------EEEEEEEE---EEEEEEE----------HHHHHHHHHHHHHHHHH---	-0.7	+7.1	+0.04
eva4	-----------------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH------EEEEEEEE-----EEEEE-----EEEEEEE----EEE-E-----EEEEEE-------EE-------EEEEEEEE---EEEEEEEE---------HHHHHHHHHHHHHHHHH---	-0.9	+0.5	+0.03
jpred	------EEEEE------HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH----------EEEEEE-----EEEE-------EEEEE-----E-EEEE----EEEEEE-------EE-------EEEEEEE-----EEEEEE----------HHHHHHHHHHHHHHHHH---	-1.6	+5.2	+0.02
phd	----EEEE---------HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-----HHHHHH-EEE----EEEE-----EEEEEEEE----EEHHHH------EEEE----------------EEEEEEE----EEEEEEEE---------HHHHHHHHHHHHHHHHH---	+3.1	+12.0	+0.11
phdpsi	-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEEE-----EEEEE-----EEEEEE----EEEEEE-------EEE------EEEEEEE----EEEEEEEE---------HHHHHHHHHHHHHHHHH---	+0.3	-3.6	+0.06
prof	---------HHHHHH--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEE-----EEEEEE-----EEHHHHH---EEEEEE------EEEE------EEEEEEEE---EEEEEEE----------HHHHHHHHHHHHHHHHH---	-2.9	+2.3	0.00
psipred	-------HHHH------HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-----EEEEEEEE-----EEEEEEE---EEEEEE-----EEHHHHH---EEEE--------EEE--HHHH--EEEEEEE---EEEEEEE----------HHHHHHHHHHHHHHHHH---	+0.2	+7.1	+0.03
pssp	---EEEEE----------HHHHHHHHHH--------EEEEEEE----HHHHHHHHHHHHHHHH--EEEEE------EEEE------HHHHH-----EEE------EEEEEE------EEEEE-----EEEEEEEEE-----EEEEEE-----------HHHHHHHHHHHHH--HH-	-6.2	+5.7	-0.07
sspro	-----------------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-----H-HHEEEEEE-----EEEE------EEEEEEE----EEE-E-----EEEEEE-------EE-------EEEEEEEE---EEEEEEEE---------HHHHHHHHHHHHHHHHH---	-1.7	+1.4	0.00

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : abbreviation of prediction method (seq=sequence)
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

All results

Last update: Dec 29, 2000
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva
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