Home - sec - acc - cm - fr - con - Bottom

EVA results for 1dfc:A

DATE : 2000_11_22
TYPE : sec
NRES : 475
HEADER : STRUCTURAL PROTEIN
COMPND : MOL_ID: 1;
SOURCE : MOL_ID: 1;
AUTHOR : A.A.FEDOROV, E.V.FEDOROV, S.ONO, F.MATSUMURA, S.C.ALMO

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,....33...,....34...,....35...,....36...,....37...,....38...,....39...,....40...,....41...,....42...,....43...,....44...,....45...,....46...,....47...,
seq	EAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKVGGRYLKGDHAGVLKASAETVDPASLWEY
dssp	-E---EE-EE-----E-EE------EE-----------EE----E--E-----EEEE-----EEEEE----HHH-EE--E-----E--EE-----EEEEE--EEEEEE----HHH-EEE------EEEEEE-----EEEE-------EEEEE---------EEEEE----EEEEE----EE-----EE----HHH-EEEEE---EEEEEE----EEEE------EEE-----------EEEEE---EEEEE-----EEE--E-EEEE----HHH-EEEEE------EEEEE---EEEEE----EEEEEE----HHH-EEEEEE--EEEEE-----E-EE----EEE----------EEEEEE-----E--EE--EEEEE-----EEEEEE-----EEEEEE--EEEEE-----E-EE----EEE--------EEEEEEE--EEEEEE--EEEEE-HHHEEEEEE----HHH-EE-
eva3	-EEEEEEEEE----EEEEEEE---EEE--HHHH---EEEEE-HHHHEEH----EEEE-----EEE---------EEEEEE-----EEEEE----EE------EEEEE-------HHEEEEEEEEEEEEEE----EEEEE-------EEEE----------EEEEEE---EEEEE------E-----E--------EEEEEE---EEEEE-----EEE-----HEE-----------HEEEHH----EEEEEE----EEEEEEEEE---------EEEEEEE-----EEEE-----EEEEEE---EEE--------EEEEEEE---EEEEE----EEEEEE---EEEEEE------HHHHHHH----EEEEE----EEEEE----EEEE------EEEEEE---EEEEE-----EEEE-----EEE-------EEEEEE---EEEEEE--EEEE-----EEEE--------H----	-6.2	-1.0	-0.17
eva4	-EEEEEEEEE-----EEEHHH---EE---HHHHH-HHHEEEHHHHHHHHHH--EEEE-----EEE---------EEEEEE-----EEEEH-H-H---------EEEE-----H-HH-EEEEE----EEEEE----H-EE-------EEEEE--------EEEEEEEH---EEEEE----EE-----EEE------EEEEEE---EEEEE-----EE------HHH---------HHHHHHHHH---HEEEEE-----EEEEEEEE---------EEEEEEE----EEEEE-----EEEEE----EEEE--------EEEEEE---EEEEEE---EEEEEE----EEEEE-----HHHHEEEEE---EEEEE----EEEEE-----E-------EEEEEEE----EEEE-----EEEE-----EEE-------EEEEE----EEEEEE--EEEE-----EEEE---------EE--	-10.0	-4.4	-0.18
eva5	-EEEEEEEEE-----EEEHHH---EE---HHHHH-H-HEEEHHHHHHHHH---EEEE-----EEE---------EEEEEE-----EEEEE-H-H--------EEEEE-----H-HH-EEEEE----EEEEE----H-EE-------EEEEE--------EEEEEEE----EEEE-----EE-----EEE------EEEEEE---EEEEE-----EE------HHH---------HHHHHHHHH---HEEEEE-----EEEEEEEE---------EEEEEEE----EEEEE-----EEEEE----EEEE--------EEEEEE---EEEEE----EEEEEE----EEEEE-----HHHHEEEEE---EEEEE----EEEEE----EE-------EEEEEEE---EEEEE-----EEEE-----EEE-------EEEEE----EEEEEE--EEEE-----EEEE---------E---	-9.5	-5.3	-0.24
eva6	-EEEEEEEEE-----EEEEHH---EE---HHHHHHHHHEHHHHHHHHHHH---EEEE-----EEE---------EEEEEE-----EEEEE---HE-------EEEEE-----H-HH-EEEEE----EEEEE----H-EE-------EEEEE--------EEEEEEEH---EEEE-----EE-----EEE------EEEEEE---EEEEE-----EE------HHH----------HHHHHHH-----EEEEE-----EEEEEEEE---------EEEEEEE----EEEEE-----EEEEE----EEEE--------EEEEEE---EEEEE----EEEEEE---EEEEEE-----HHHHHHHEE---EEEEE----EEEEE----EE-------EEEEEEE---EEEEE-----EEEE-----EEE-------EEEEE----EEEEEE--EEEE-----EEEE-------------	-9.9	-0.6	-0.19
jpred	-----EEEEE-----EEEEEE------------HHHHHHHHHHHHHHHH----EEEE-----EEE---------EEEEEE-----EEEEE----EEE-----EEEEE-----------EEEE----EEEE----EEEEE-------EEEE--------HHHHHHHHH---EEEE-----EE-----EEE------EEEEEE---EEEEE-----EEE-----EEEE---------HHHHH--------EE------EEEEEEEE---------EEEEEEE-------EEE-----EEEEE----EEE--------EEEEEEE---EEEEE-----EEEEE---EEEEEE------HHHHHHHH---EEEEE----EEEE------E--------EEEEEE----EEEE-----EEEE----EEEE-------EEEEE----EEEEE----EE------EEE--------------	-6.9	+0.4	-0.16
phd	---EEEEEE-------EE------------HHHH-----EHHHHHHHHHH----EEE-----EEEE--------EEEEEE------EEHHHH---EE-----EEEEE--------EEEEEEEE--EEEEE---HHHHHH-------EEEE-----------EEEEEE--EEEEE------------EE-------EEEEEE---EEEEE-----EEE-----EEEE-----------EEEE-----HHHHEE------EEEEEEE---------EEEEEE---------------EEEEE-----E----------EEEEEE----EEEE-----EEEEE---EEEEEE-----HHHHHHHH----EEEEE-------EE----E-E-------EEEEEE---EEEEE-----EEEEE---EEEE-------EEEEEE---EEEEEE--EEEE-----EEE--------------	-5.1	-3.3	-0.08
phdpsi	---EEEEEEE------EE-EE---EEE---HHH-----EEEE-EEEEE-----EEEE----EEEEE--------EEEEEE-----EEEEE----EEE-----EEEEEEE-------EEEEEEE--EEEEEE---EE-EEE------EEEE----------EEEEEEE--EEEEEE-----------EE-------EEEEEE---EEEEE-----EEE------EEE----------EEEEE-----EEEEEE----EEEEEEEEE---------EEEEEEE----EEEEEE----EEEEEE---EEE--------EEEEEEE---EEEEE----EEEEEE---EEEEEE-----HHHHHHEE----EEEEE----EEEEE----EE--------EEEEEE---EEEEE-----EEEEE----EEE-------EEEEEE---EEEEEE---EEE-----EEEE-------------	-1.3	+3.1	-0.06
prof	--EEEEEEEEE----EEEE-----EEE--HHHHHH---EEEHHHHHHHH----EEEEE----EEEE-------EEEEEEE-----EEEEE------------EEEEEE--------EEEEEEE---EEEE--HHHHEEE-------EEEEE--------EEEEEEE----EEEE---HHHH------E-------EEEEEE---EEEEE-----EE------EEEE-----------EEEEE----EEEEEE----EEEEEEEEE---------EEEEEE-----EEEEEE----EEEEEE---EEEE-------EEEEEEE---EEEEEE---EEEEEE---EEEEEE-----HHHHHHHHH---EEEEE----EEEEE----EEE------EEEEEEE---EEEEE-----EEEE----EEE--------EEEEE----EEEEEE--EEE------EEEE-------------	-5.3	-1.4	-0.13
psipred	-EEEEEEEEEE---EEEEEEE---EEE--HH----EEEEEE-HHHHHHHH---EEEE-----EEE---------EEEEEE-----EEEEEE------------EEEE-----HHHH----EEEEEEEEEE----HHEE---------EEE-------HHHHHHEEE----EEEE-----EEEE--EE-----HHHEEEEEE---EEEEE-----EEEE---HH-----------HHHHHHHHH----EEEEE----EEEEEEEEE--HH-----EEEEEEE-----EEEE-----EEEEEE--EEEE---------EEEEEE---EEEEE----EEEEE----EEEEEEE-----HHHHHHHH---EEEEE-----EEEE----EEEE------EEEEEE---EEEEE-----EEEE----EEEE--------EEEEE---EEEEEE--EEEE-----EEEE------HHH----	-7.9	-3.1	-0.18
pssp	--EEEEEEHH------HHHH----EE-HHHHHHHHHHHHEEHHHHHHHHHH--EEE------EEEEEE------EEEEEEE-----HHHHHHHHH--------EEEE-----------EEEEEE----EEEEHHHHHHH------HH------------HHEEEE--------HH--HH-HH----EEE------EEEEE-----EEEEE---EEEEE------------EE---HHHHHHHHHHHHHHHHHHHH-----HH---------HHHHHEEE------EEEEEEE---EEEEEE----EEE------EEEEEE----EEEEEEE---EEEEE-------EE-HH--HHHHHHHHH----EEEE-----EEEEEEEEEEE--------EEEEEE----EEE-----EEEEEE---EEEEE----EEEEEEHH----EEEEE----------HHHHHH----------EE	-13.3	-9.2	-0.14
sspro	-EEEEEEEEE-----EEEHHH---EE---HHHHHHHHHHHHHHHHHHHHHH--EHEE-----EEE---------EEEEEE-----HHHHH-HHH---------EEEE-----H-HH-EEEEE----EEEEE----H-EE-------EEEEE--------EEEEEEEH----EEEE----EE-----EEEE-----EEEEEE---EEEEE-------------HHH---------HHHHHHHHH---HEEEHE-----EEEEE------------EEEEEEE----EEEEE-----EEEEE----EEEE--------EEEEEE---EEEEEE---EEEEEE----EEEEE-----HHEEEEEEE---EEEEE----EEEEE-----E------EEEEEEEE----EEEE-----EEEE-----EEE-------EEEEE----EEEEEE--EEEE-----EEEE---------EE--	-11.0	-3.6	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : abbreviation of prediction method (seq=sequence)
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

All results

Last update: Dec 29, 2000
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva
WWW mirrors: ../../../doc/mirrors.html

Home - sec - acc - cm - fr - con - Top