EVA results for 1qw2:A

DATE : 2004_03_09
TYPE : sec
NRES : 102
HEADER : STRUCTURAL GENOMICS, UNKNOWN FUNCTION
COMPND : 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN TA1206;
SOURCE : 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM;
AUTHOR : A.SAVCHENKO, E.EVDOKIMOVA, M.KUDRYTSKA, A.E.EDWARDS,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10.
seq	NYFQGHMXQIDSIEIGGKVYQFFKSDLGNAPLLFIKGSKGYAXCGYLNXETSNKVGDIAVRVXGVKTLDDXLSAKVVEASQEAQKVGINPGDVLRNVIDKLG
dssp	-------EEEEEEEE--EEEEEEEE------EEEEE----EEE-----HHHHHH----EEE------HHHHHH-E--EE-HHHHH-------EHHHHHHHH-
apssp2	-----------EEEE--EEEEEEEE------EEEEE----E----HH---HHHH---EEEE---E--HH------HHHHHHHHHH-------EHHHHHHH--	+2.6	+4.3	+0.03
phd	----EEEEEEEEEEE--EEEEEEEEE-----EEEEE---EEEEEE--HHHHHHHHH--EEEEE----HHHHHHH-HHHHHHHHHH--------HHHHHHH--	+7.9	+17.1	+0.17
phdpsi	----EEEEEEEEEEE--EEEEEEEEE-----EEEEE---EEEEEE--HHHHHHHHH--EEEEE----HHHHHHH-HHHHHHHHHH--------HHHHHHH--	+6.6	+16	+0.15
prof_king	-----EEEEEEEEEE--EEEEEEEE------EEEEE-----EEEE-----HHH----EEEEEE--E-HHHHH--HHHHHHHHHHHH------HHHHHHHH--	+5.9	+9.5	+0.12
profsec	-------EEE-EEEE--EEEEEEEEE-----EEEEE----EEEEEE--HHHHHHH---EEEE--EEEE------EEEHHHHHHHH-------HHHHHHHH--	+2.5	+3.7	+0.06
psipred	-----------EEEE--EEEEEEEEE-----EEEEE----EEEEEE--HHHHHH---EEEEEEE---HHHHH---HHHHHHHHHH-------HHHHHHHH--	+3.5	+8.8	+0.07
sable	---------EEEEEE---EEEEEEEE-----EEEEE----EEEE----HHHHHHH--EEEEEEE----HHH---HHHHHHHHHHH-------HHHHHHHH--	+3.8	+9.0	+0.08
sable2	-----H---EEEEEE---EEEEEEE------EEEEE----EEEEHHHHHHHHHHH--EEEEEEE---HHHHH-HHHHHHHHHHHHH-----HHHHHHHHH--	-2.1	+2.0	-0.02
samt99_sec	-----EEEEEEEEEE---EEEEEEE------EEEEE----EEEE----HHHHHHH--HEEEEH----HHHHHH--HHHHHHHHHHH------HHHHHHHHH-	+8.9	+18.7	+0.21
scratch	------EEEEEEEEE--EEEEEEEE------EEEEE---EEEEEEEEEHHHHHH---EEEEE-----HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH-	+6.0	+7.1	+0.20
sspro4	-----EEEEEEEEEE--EEEEEEEE------EEEEE---EEEEE-H--HHHHHHH--EEEEEE----HHHHH---HHHHHHHHHHH------HHHHHHHH--	+5.8	+16.1	+0.11
yaspin	--------EEEEEEE--EEEEEEEEE-----EEEEE----EEEE----HHHHHH---EEEEEE------------HHHHHHHHHHH-------HHHHHHH-	+7.7	+9.8	+0.06

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 24, 2004
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva