| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3.. |
| seq | AVCVYRTCDKDCKRRGYRSGKCINNACKCYPY | | | |
| dssp | ----HHHHHHHHH-----EEEEE--EEEEE-- | | | |
| apssp2 | -EEEE----HHHHH-------E-----E---- | -27.9 | -25.1 | -0.22 |
| jufo | -EEEEEE------------------------- | -37.6 | -56.7 | -0.18 |
| phd | -EEEEE-------------------------- | -40.2 | -58.7 | -0.19 |
| phdpsi | -EEEEE-------------------------- | -41.5 | -59.9 | -0.21 |
| prof_king | --EEE----HH--------------------- | -31.8 | -42.7 | -0.13 |
| profsec | -EEEEEEE-----------HHHHHHHHH---- | -49.9 | -54.2 | -0.09 |
| prospect | -------------------HHHHHH--EEE-- | -27.6 | -39.4 | -0.02 |
| psipred | -EE------HHHHH------------------ | -32.0 | -46.4 | -0.14 |
| sable | -EEEEEE------------------------- | -44.3 | -66.2 | -0.22 |
| sable2 | -EEEEE-------------------------- | -45.4 | -64.7 | -0.30 |
| samt99_sec | -EEEEEE--------------EE--------- | -37.8 | -46.6 | -0.34 |
| scratch | -EEEEEE-------------HHH--------- | -44.1 | -55.9 | -0.14 |
| sspro4 | -EEEEEE-------------HHH--------- | -44.3 | -50.7 | -0.17 |
| yaspin | -EEEEEE--HHHHH----------------- | -32.7 | -43.3 | -0.09 |