EVA results for 1qz8:A

DATE : 2004_02_24
TYPE : sec
NRES : 111
HEADER : UNKNOWN FUNCTION
COMPND : 2 MOLECULE: POLYPROTEIN 1AB;
SOURCE : 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS;
AUTHOR : M.P.EGLOFF, F.FERRON, V.CAMPANACCI, S.LONGHI, C.RANCUREL,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11
seq	ELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
dssp	-E-----EEEEEEEE------EEEEEEEEEE------EEEEEEE------EEEEE------EEEEEE---EEEEE------EEEEEEEE----HHHHHHHHHHHHHH--E-
apssp2	----HHHHEEEEE------E------EEEEE-----EEEEEEE------EEEEE-------EEEEE-----EEEEE-----EEEEEEEEE----HH-HHEEEE--EEEEE-	-4.5	-1.2	-0.13
jufo	-------HHH----------------EEEE------EEEEEEEE----EEEEEEE------EEEEE--------EE----EEEEEEEEEE--------EEE-----EEE--	-7.5	-2.4	-0.17
phd	----HHHHHHHHH-------------EEEEEE----EEEEEEEE-----EEEEEEE----EEEEEEE----EEEEE-----EEEEEEEE------E--EEEEEEEEEEEE-	-7.4	+2.3	-0.10
phdpsi	----HHHHHHHHH-------------EEEEEE----EEEEEEEE-----EEEEEEE----EEEEEEE----EEEEE-----EEEEEEEE------E--EEEEEEEEEEEE-	-8.7	+1.1	-0.12
prof_king	------EEEEEEE------------EEEEEE-----EEEEEEEE-----EEEEEEE----EEEEEEE----EEEEE-----EEEEEEEEE-------EEEEEE--EEEEE-	-0.2	+10.5	-0.06
profsec	-------EEEEEE-------------EEEEE-----EEEEEEEE-----EEEEEEE-----EEEEEE----EEEEE-----EEEEEEEEE--------EEEEEEEEEEEE-	-1.9	+5.0	-0.08
prospect	--------EEEEE-------------EEEEE-----EEEEEEE------EEEEEE-----EEEEEE------EEE------EEEEEEEEE-HHHHHH--EEEE---EEEE-	+0.6	+10.4	-0.05
psipred	-------EEEEEE-------------EEEEEE----EEEEEEEE-----EEEEEE-----EEEEEEE----EEEEE-----EEEEEEEE-----HHHHEEEEEEEEEEEE-	+0.8	+11.5	-0.00
sable	-------EEEEEE-------------EEEEE-----EEEEEEEE-----EEEEEE-----EEEEEE-----EEEEE-----EEEEEEEE----HHHHHHHHHHE-EEEEEE	+5.5	+14.5	+0.10
sable2	---H-HHEEEEEE-------------EEEEE-----EEEEEEE------EEEEEE-----EEEEEE-----EEEEE-----EEEEEEEE---HHHHHHHHHHHHHHEEEEE	+1.4	+8.0	+0.04
samt99_sec	----HHHHHHHHH-------------EEEEE-----EEEEEEEE-----EEEEEE------EEEEEE----EEEE------EEEEEEEE----HHHHHHHHHHHHHEEEE-	+4.0	+11.3	+0.07
scratch	-------EEEEEE-------------EEEEE-----EEEEEEEE-----EEEEEE------EEEEEE----EEEE------EEEEEEEE-----H---EEEEEE--EEE--	+0.2	+7.1	-0.02

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Mar 3, 2004
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva