EVA results for 1nnv:A

DATE : 2004_01_27
TYPE : sec
NRES : 107
HEADER : UNKNOWN FUNCTION
COMPND : 2 MOLECULE: HYPOTHETICAL PROTEIN HI1450;
SOURCE : 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE;
AUTHOR : L.M.PARSONS, J.ORBAN

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,..
seq	MTTEIKKLDPDTAIDIAYDIFLEMAGENLDPADILLFNLQFEERGGVEFVETADDWEEEIGVLIDPEEYAEVWVGLVNEQDEMDDVFAKFLISHREEDREFHVIWKK
dssp	---------HHHHHHHHHHHHHHH------HHHHHHHHH------EEEEE-------------------EEEEEE----------EEEEEEE--------EEEEE--
apssp2	---HHH-----HHHHHHHHHHHHH------HHHEEEEEEEE------EEE---HHHHHHH--EE-HH---EEEEEEE--HHHHHHHHHHHHH--------EEEEE--	-14.1	-26.6	-0.17
jufo	-------------HHHHHHHHHHHH---------HHHHHHHHH--------------HHH-------HHHHHEEE------HHHHHHHHHHHH--------------	-9.0	-4.8	-0.17
phd	-HHHHHH----HHHHHHHHHHHHHHHH-------EEEEEEE-----EEEE----HHHHHH--------EEEEEEEEE-----HHHHHHHHHH-------EEEEEEE-	-12.4	-9.7	-0.12
phdpsi	-HHHHHH----HHHHHHHHHHHHHHHH-------EEEEEEE-----EEEE----HHHHHH--------EEEEEEEEE-----HHHHHHHHHH-------EEEEEEE-	-13.8	-11.0	-0.14
prof_king	-EEEEEE------HHHHHHHHHHH--------EEEEEEEEEE-----EEE-----HHHH---------EEEEEEEE-----HHHHHHHHEEE-------EEEEEEE-	-9.9	-6.4	-0.14
profsec	---EEE-----HHHHHHHHHHHHHH-----HHHEEEE-EEE-----EEEEE----HHHH---E-----EEEEEEEEE-----HHHHHHHHH-------EEEEEEEE-	-9.4	-15.5	-0.13
psipred	---EEEE--HHHHHHHHHHHHHHH---------EEEEE--------EEEEE----HHHH--------EEEEEEEEEE--HHHHHHHHHHHHH-------EEEEEE--	-10.1	-12.6	-0.15
sable	-HHHH------HHHHHHHHHHHHH--------EEEEEEEEE-----EEEE-----HHHH--EE---HHHEEEEEEEE---HHHHHHHHHHHH-------EEEEEEE-	-15.8	-25.1	-0.15
samt99_sec	-HHHHH---HHHHHHHHHHHHHHHHH-----HHEEEEEEEHHH---EEEE----HHHHHH-----HHHHEEEEEEE---HHHHHHHHHHHHHH------EEEEEE--	-17.3	-16.4	-0.11
scratch	--EEE----HHHHHHHHHHHHHHHHHH---H--EEEEEE-EH----EEEE-----HHHH---E--HHHHEEEEEEE---HHHHHHHHHHHHH---H----EEEEE--	-13.4	-23.4	-0.13
yaspin	--EEEEE-----HHHHHHHHHHHH---------EEEEE--------EEEE-----HHHH--EEE---EEEEEEEEE--------HHHHHHH--------EEEEEE-	-5.5	-16.0	-0.12

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Feb 18, 2004
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva