EVA results for 1roc:A

DATE : 2003_12_23
TYPE : sec
NRES : 155
HEADER : REPLICATION, CHAPERONE
COMPND : 2 MOLECULE: ANTI-SILENCING PROTEIN 1;
SOURCE : 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
AUTHOR : S.M.DAGANZO, J.P.ERZBERGER, W.M.LAM, E.SKORDALAKES, R.ZHANG,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,
seq	GASIVSLLGIKVLNNPAKFTDPYEFEITFECLESLKHDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKVQVDHIVRNILAEKPRVTRFNIVWD
dssp	----EEEEEEEE----EE----EEEEEEEEE-------EEEEEEE----------EEEEEEEE-----EEEEEEEEE----HHH---HHHH--EEEEEEEEE--EEEEEEEEEEEEEE--HHHHH-------HHHEEEEE-----EEEE------
apssp2	---EEEEEEEEE-----HH---EEEEEEEEEHH------EEEEEEE---------EEEEEEEE-----E-EEEEEE------------HH-EEEEEEEEEEE--EEEEEEEEEE------HHH---------HHHHHHHH------EEEEE----	+5.0	+10.9	+0.05
jufo	---EEE--EEEE------------EEEHHHHHH-----EEEEEEEE----------HH------------EEEEEE----------------EEEEEEEEE----EEEEEEEEE-----------------HHHHHHHHHH----EEEEEE----	-3.8	-3.2	-0.09
phd	--EEEEEEEEEEE----------EEEEEHHHHHHHHH--EEEEEEEEE---------EEEEE--------EEEEEEE------EE----EEEEEEEEEEEE---EEEEEEEEEEEE----------------HHHHHHHHH-----EEEEEEEE-	-6.0	-0.1	-0.13
phdpsi	--EEEEEEEEEEE----------EEEEEHHHHHHHHH--EEEEEEEEE---------EEEEE--------EEEEEEE------EE----EEEEEEEEEEEE---EEEEEEEEEEEE----------------HHHHHHHHH-----EEEEEEEE-	-7.5	-1.4	-0.15
prof_king	--EEEEEEEEEEEE---------EEEEEEEEH-------EEEEEEEE----------EEEEEE-------EEEEEE--------------EEEEEEEEEEE----EEEEEEEEE------------------HHHHHHEE------EEEEEEE--	-1.2	+6.1	-0.08
profsec	---EEEEEEEEEE---------EEEEEEEEHHHH-----EEEEEEEE--------EEEEEEEE-------EEEEEEE------------EEEEEEEEEEEEE---EEEEEEEEEE-----HHHH-------HHHHHHHHHHH----EEEEEEEE-	-1.3	+5.5	-0.08
prospect	---EEEEEEEEEE-----------EEEEEHHHHHHH---EEEEEEE----------HHHH----------EEEEEE----------------EEEEEEEEE----EEEEEEEEEE-----HHHHH------HHHHHHHHH------EEEE-----	-2.0	+3.8	-0.04
psipred	--EEEEEEEEEE----------EEEEEEEEEEE------EEEEEEEE--------EEEEEEE-------EEEEEEE----------HHH-EEEEEEEEEEEE---EEEEEEEEEE-----HHHH--------HHHEEEEE------EEE------	+7.5	+16.3	+0.08
sable	--EEEEEEEEEE----------EEEEEEEEHHHH----EEEEEEEE---------HHHHHEE-------EEEEEEE-------------EEEEEEEEEEEE----EEEEEEEEE-----HHHH--------HHHHHHHHHH-----EEEEE----	-6.6	-0.4	-0.11
samt99_sec	---EEEEEEEEE----------EEEEEEEEEEHHH---EEEEEEEE---------HEE--EE--------EEEEEE----------HHHHHEEEEEEEEEE----EEEEEEEEE------------------HHHHHHHH-------EEEE----	-1.7	+0.3	-0.06

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 31, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva