EVA results for 1j27:A

DATE : 2003_12_02
TYPE : sec
NRES : 98
HEADER : STRUCTURAL GENOMICS, UNKNOWN FUNCTION
COMPND : 2 MOLECULE: HYPOTHETICAL PROTEIN TT1725;
SOURCE : 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;
AUTHOR : A.SETO, M.SHIROUZU, T.TERADA, K.MURAYAMA, S.KURAMITSU, S.YOKOYAMA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,...
seq	MKAYLGLYTARLETPARSLKEKRALIKPALERLKARFPVSAARLYGLDAWGYEVVGFTLLGNDPAWVEETMRAAARFLAEAGGFQVALEEFRLEAFEL
dssp	-EEEEEEEEEEEE-----HHHHHHHHHHHHHHHHHH---EEEEEE------EEEEEEEEEE--HHHHHHHHHHHHHHHHH----EEEEEEEEEEEEE-
apssp2	--EEEEEEEEEEE----HHHHHHHHHHHHHHHHHHH--EEEEEE--------EEEEEEEE---HHHHHHHHHHHHHHHHH----EEEEE-EEEEEEEE	+16.7	+19.3	+0.4
jufo	---------------HHHHHHHHHHHHHHHHHHHH-----------------EEEEEEE------HHHHHHHHHHHHHHHH-----HHHHHHHHHHHH	-12.5	-10.8	0.00
phd	--EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--EEEEE----HHHHHHEEEEEEE----HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH	-15.1	-5.3	-0.10
prof_king	-HHHH--EEEEE---HHHHHH------HHHHHHHH---EEEE----------EEEEEEEE----HHHHHHHHHHHHHHHH----EEEEEEEHHHH---	-3.5	+2.2	0.00
profsec	--EEEEEEEEEEEE----HHHHHHHHHHHHHHHHHH---EEEEE----HHH-EEEEEEEE---HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH	-0.4	+10.2	+0.04
prospect	--EEEEEEEEEEE-----HHHH-HHHHHHHHHHHH---EEEEEE----HHHH-EEEEEEEE--HHHHHHHHHHHHHHHH-----EEEEEEEEEEEEE-	+16.8	+18.7	+0.33
psipred	---EEEEEEEEEEE-HHHHHHHHHHHHHHHHHHHHH----EE---------EEEEEEEEE---HHHHHHHHHHHHHHHHH----EEEHHHHEEEEEE-	+9.1	+9.0	+0.21
sable	-EEEEEEEEEEEE------HHHHHHHHHHHHHHHH----EEEEE--HHHHHEEEEEEEEE---HHHHHHHHHHHHHHHHH----EEEEEEEEEEEEEE	+10.9	+18.2	+0.32
samt99_sec	-EEEEEEEEEEE------HHHHHHHHHHHHHHHHHH--EEEEEE----HHHHEEEEEEEE---HHHHHHHHHHHHHHHHH----EEEEEHHEEEHE--	+12.6	+5.7	+0.28
scratch	--EEEEEEEEEE---H--HHHHHHHHHHHHHHHHH---EEEEEE-------EEEEEEEEE---HHHHHHHHHHHHHHHHH----EEEEEEEEEEEEEE	+15.9	+21.2	+0.38

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Dec 10, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva