EVA results for 1pi7:A
- DATE : 2003_11_11
- TYPE : sec
- NRES : 19
- HEADER : VIRUS/VIRAL PROTEIN
- COMPND : 2 MOLECULE: VPU PROTEIN;
- SOURCE : 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1;
- AUTHOR : S.H.PARK, A.A.MRSE, A.A.NEVZOROV, M.F.MESLEH, M.OBLATT-MONTAL,
Results
| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,.... |
| seq | AIVALVVAIIIAIVVWSIV | | | |
| dssp | -HHHHHHHHHHHHHHHHH- | | | |
| apssp2 | HHHHHHHHHHHHHHH--EE | -1.2 | +18.4 | -0.19 |
| jufo | HHHHHHHHHHHHHHHEEEE | +4.1 | +23.6 | -0.2 |
| phd | EHHHHHHHHHHHHHHHHHH | +18.4 | +22.5 | +0.23 |
| phdpsi | EHHHHHHHHHHHHHHHHHH | +16.8 | +21.1 | +0.21 |
| profsec | HHHHHHHHHHHHHHHHHHH | +14.6 | +18.1 | -0.35 |
| sable | HHHHHHHHHHHHHHHHHHH | +12 | +16.2 | -0.32 |
| samt99_sec | HHHHHHHHHHHHHHHHHHH | +14.6 | +19.2 | -0.34 |
| scratch | HHHHHHHHHHHHHHHHHEE | +8.5 | +18.1 | -0.16 |
Notations used
- DATE : date when added [yyyy_mm_dd]
- TYPE : prediction category
- COMPND : from PDB:DSSP: compound
- SOURCE : from PDB:DSSP: organism asf
- AUTHOR : from PDB:DSSP: authors of PDB structure
- method : name of prediction method
- prediction: actual prediction
- diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
- diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
- diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)