| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,....4.. |
| seq | AIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKY | | | |
| dssp | ----------------HHHHHHHH-----------HHHHHH- | | | |
| apssp2 | -----------HH--HHHHHH-HH------------------ | +1.1 | -11.9 | -0.20 |
| jufo | ---------------HH----HH------------------- | +1.2 | -6.4 | -0.17 |
| phd | ----------HHHHHHHHHHHHHHHH---------------- | -4.3 | +3.5 | -0.23 |
| phdpsi | ----------HHHHHHHHHHHHHHHH---------------- | -5.9 | +2.1 | -0.25 |
| profsec | ---------HHHH-HHHHHHHHHH------------------ | -3.4 | -16.5 | -0.25 |
| prospect | --------HHHHHHHHHHHHHHHH------------------ | -5.2 | -1.8 | -0.25 |
| sable | ------------HHHHHHHHHHHH-----------------H | -5.4 | +7.4 | -0.23 |
| samt99_sec | --------HHHHHHHHHHHHHHHH------------------ | -8.2 | -3.8 | -0.28 |
| scratch | ----------------HH-HHHH------------------- | +5.4 | -2.3 | +0.01 |