EVA results for 1pbu:A

DATE : 2003_07_15
TYPE : sec
NRES : 162
HEADER : TRANSLATION
COMPND : 2 MOLECULE: ELONGATION FACTOR 1-GAMMA;
SOURCE : 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR : S.VANWETSWINKEL, J.KRIEK, G.R.ANDERSEN, P.GUNTERT, J.DIJK,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16.
seq	AKDPFAHLPKSTFALDEFKRKYSNEDTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASVILFGTNNSSSISGVWVFRGQELAFPLSPDWQVDYESYTWRKLDPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK
dssp	---HHH--------HHHHHHHHHH--HHH-HHHHHH--------EEEEE----HHH------HHHHHHHHHHHHHH-HHHEEE--EEE------EEEEEEEE------HHH-HHH---HHH---EE------HHHHHHHHHHH-------------EE----
jufo	---------------HHHHHH----------HHHHHH-------EEEEEE---------EEEEHHHHHHHHHHHHHHHHHH-EEEEEEE-------EEEEEEE------------------------------HHHHHHHHHH-------------------	+3.4	-3.7	+0.06
phd	--------------HHHHHHH---------HHHHHHH-------EEEEEEE----HHHHHEEHHHHHHHHHHHHHHHHHHH--EEEEEEE-----EEEEEEEE------------------EEEEE-----HHHHHHHHHHHHH------------------	+0.5	-1.6	+0.03
phdpsi	--------------HHHHHHH---------HHHHHHH-------EEEEEEE----HHHHHEEHHHHHHHHHHHHHHHHHHH--EEEEEEE-----EEEEEEEE------------------EEEEE-----HHHHHHHHHHHHH------------------	-1.0	-3.1	+0.01
prof_king	--------------HHHHHHH------EEEEEEHHHH-------EEEEEE---------EEEEE--HHHHHHHHHHHHH---EEEEEEE------EEEEEEE--------------EEEEEEEEEE-----HHHHHHHHHHE--------H-HHH-------	-7.5	-10.7	-0.09
profsec	---HHHH-------HHHHHHH------HHH-HHHHHHH------EEEEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHH-EEEEEEEEE-----EEEEEEEE--EEEEEE---------EEEEEE-----HHHHHHHHHHHH----------EEE--EEE-	-5.8	-2.1	-0.05
prospect	--------------HHHHHHH-----HHHHHH-HHHH------EEEEEEE----HHHH--EEEEHHHHHHHHHHHHHHH-EEEEEEEE-------EEEEEEEE----------------EE----------HHHHHHHHHHHH---------HHHH------	+2.2	+2.0	0.00
samt99_sec	------------EEHHHHHH------HHHHHHHHHHH-------EEEEEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHH-EEEEEE------EEEEEEEE-------------------EEEEE-----HHHHHHHHHHHH------HH-HHH----E--	-3.1	-15.6	-0.01
scratch	----HHH-----EEHHHHHHH------HH-HHHHHHHH------EEEEEEE---HHH-EEEH-HHHHHHHHHHHHHHHHHHHEEEEEEE------EEEEEEEE------------EE---EEEEEE-----HHHHHHHHHHHHH---------HH----E--	-4.4	-0.6	-0.03

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva