EVA results for 1iuk:A

DATE : 2003_07_15
TYPE : sec
NRES : 136
HEADER : STRUCTURAL GENOMICS, UNKNOWN FUNCTION
COMPND : 2 MOLECULE: HYPOTHETICAL PROTEIN TT1466;
SOURCE : 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;
AUTHOR : T.WADA, M.SHIROUZU, S.-Y.PARK, J.R.TAME, S.KURAMITSU, S.YOKOYAMA

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,.
seq	MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVADRCLMVEHKRLFRG
dssp	--HHHHHHHHHH--EEEEE--------HHHHHHHHHHH---EEEEE-HHH---EE--EE-E--HHH------EEEE---HHHH---HHHHHHH----EEE------HHHHHHHHH----EEE---HHHHHHHHH--
jufo	---HHHHHHHH---EEEEEEEE-----HHHHHHHHHHHH-EEEEEEE----------EEHHHHH--------EEEEEE---HHHHHHHHHHH----EEEEEE---HHHHHHHHHHH-EEEE--------HHH----	-0.1	+2.4	+0.07
phd	---HHHHHHHH---EEEEEEE-------HHHHHHHHHHH--EEEEE--------------HHHHHHH-----EEEEEE----HHHHHHHHHHH---EEEEE----HHHHHHHHHH---EEE---------------	+0.2	+3.6	+0.04
phdpsi	---HHHHHHHH---EEEEEEE-------HHHHHHHHHHH--EEEEE--------------HHHHHHH-----EEEEEE----HHHHHHHHHHH---EEEEE----HHHHHHHHHH---EEE---------------	-1.3	+2.1	+0.02
prof_king	--HHHHHHHHH---EEEEEE---------HHHHHHHHH---EEEE-------HHH------HHHH------EEEEEE---HHHHHHHHHHHH----EEEEEE----HHHHHHHHH---EEEE---HHH---HH---	+3.5	+6.3	+0.07
profsec	--HHHHHHHH----EEEEEEE-------HHHHHHHHHH---EEEEE-------EE-------HHHHH-----EEEEE---HHHHHHHHHHHHH---EEEEE----HHHHHHHHHH---EEE---------------	+1.5	+2.7	+0.07
prospect	--HHHHHHHH----EEEEEEE-------HHHHHHHHHH---EEEEE-------EE--EEEE--HHHH-----EEEEE--HHHHHHHHHHHHHH---EEEEE---HHHHHHHHHHH---EEE-----EEE-HHHH--	+9.7	+15.5	+0.17
samt99_sec	---HHHHHHHH---EEEEEE------HHHHHHHHHHHHH--EEEEE-------------E---HHH-----EEEEEE--HHHHHHHHHHHHHH---EEEE-----HHHHHHHHHHH--EEE-----EEE-------	+0.9	+5.6	+0.02
scratch	--HHHHHHHHH---EEEEEE--------HHHHHHHHHH---EEEE------HHHH--------HHH------EEEEEE-HHHHHHHHHHHHH----EEEEE---HHHHHHHHHHH---EEE------EH-------	+0.1	+2.0	0.00

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jul 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva