EVA results for 1n7z:A

DATE : 2003_06_10
TYPE : sec
NRES : 328
HEADER : VIRUS/VIRAL PROTEIN
COMPND : 2 MOLECULE: BASEPLATE STRUCTURAL PROTEIN GP8;
SOURCE : 2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE T4;
AUTHOR : P.G.LEIMAN, M.M.SHNEIDER, V.A.KOSTYUCHENKO, P.R.CHIPMAN,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25...,....26...,....27...,....28...,....29...,....30...,....31...,....32...,...
seq	IYRAIVTSKFRTEKXLNFYNSIGSGPDKNTIFITFGRSEPWSSNENEVGFAPPYPTDSVLGVTDXWTHXXGTVKVLPSXLDAVIPRRDWGDTRYPDPYTFRINDIVVCNSAPYNATESGAGWLVYRCLDVPDTGXCSIASLTDKDECLKLGGKWTPSARSXTPPEGRGDAEGTIEPGDGYVWEYLFEIPPDVSINRCTNEYIVVPWPEELKEDPTRWGYEDNLTWQQDDFGLIYRVKANTIRFKAYLDSVYFPEAALPGNKGFRQISIITNPLEAKAHPNDPNVKAEKDYYDPEDLXRHSGEXIYXENRPPIIXAXDQTEEINILFTF
dssp	--EEEE-HHHHHHHHHHHHHHE------E-EEEEEE------HHHH------------HHHHHHHHHHEEEEEEE-HHHEEEEEE--E----------------EEEE-------------EEEEEEEE----EEE-------HHHHHH----EEE----------------EE------EEEEEEEE-HHHHHHH----EEEE--HHHHHH-HHHH-------HHHH---HHHH----EEEE-EEEE----HHHH------EEEEEEEE--EE----------E----EE-HHHE-----EEEEEEEEEEE------EEEE--EEE-
apssp2	EHHHHHHH---HH---HHHHH--------EEEEEE------------------------E-----------E-E------HHH---------------EEEE--EEEE-------------EEEEEEE---------E-----HHHHHH-----------------------E------HHHHHHHH-----E-------EEEE---HHHH------------EE------EEEEEE--EEEEEEE-----------------EEEEEE---HHH-----------------HHH----------------E--E-----EEEEEEE-	-12.4	-22.1	-0.21
phd	EEEEEEE---E-HHHHHHH----------EEEEEE-----------EE----------EEEEEE-EEE---EEEEE-HHHHH----------------EEEEEEEEEEE------------EEEEEEEE-----EEEEEE----HHHHH----------------------EEE-----EEEEEHHH------------EEEEE------------E---------E----EEEEE---EEEEEEE-----------------EEEEEE-----------------------HHHHH-----EEEE-----EEEEE----EEEEEE--	-8.0	-8.3	-0.14
phdpsi	EEEEEEE---E-HHHHHHH----------EEEEEE-----------EE----------EEEEEE-EEE---EEEEE-HHHHH----------------EEEEEEEEEEE------------EEEEEEEE-----EEEEEE----HHHHH----------------------EEE-----EEEEEHHH------------EEEEE------------E---------E----EEEEE---EEEEEEE-----------------EEEEEE-----------------------HHHHH-----EEEE-----EEEEE----EEEEEE--	-9.8	-9.9	-0.17
prof_king	EEEEEEE-------HEEEEE---------EEEEEE-----------------------EEEEEEEEEE---EEEE---HH------------------EEEE-EEEEE-------------EEEEEEE-------EEEEEE----HHE-----------------------EEEE----EEEEEEE-------------EEEEE--------------------E-----EEEEEE---EEEEEEH-----------------EEEEEE---------------------------------EEEE-----EEEE-----EEEEEEE-	-12.8	-20.6	-0.20
profsec	EEEEEEEE----HHH--EE----------EEEEEE-----------------------EEEEE-EEEE---EEEEE-----EEEE-------------EEEE--EEEE-------------EEEEEEEE------EEEEEE--HHHHHH---------------------EEEEE----EEEEEEEEE----EE-----EEEEE---HHH--------------EEE---EEEEEEE--EEEEEEEE-----HHHH------EEEEEEEE--HHHH----------------HHHHH--------------EEEEE-----EEEEEE-	-10.3	-12.9	-0.18
samt99_sec	EEHEEEH-----HHHHHHH----------EEEEEE------------------------E-----HH----EEEE-----------------------EEEE-EEEEE-------------EEEEEEE--------EEE----HHHHHHH-----------------------------EEEEEEEE-----EE------EEEE---HHH-------------EE------EEEEE---EEEEEEEH-----------------EEEEE---HHHH----------------HHHHHHH---EEE------EEEE-----HEEEEEE-	-11.3	-16.4	-0.20
scratch	EEEEEEE----HHHHHHHH----------EEEEEE-----------------------E-----HHHHHH---HH---HHH-----------------EEEE--EEEE-------------EEEEEE--------EEEEE----HHHHH------------------------E-----EEEEEEEE-----EEE----EEEEE---HHH---------------------EEEEEEE-EEEEEEEE-------H---------EEEEE----HH-----------------HHHHHH---HHEEH-----EEEE---HHHHHHHE--	-11.3	-14.4	-0.19

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jun 23, 2003
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva