EVA results for 1kq5:A

DATE : 2002_01_16
TYPE : sec
NRES : 156
HEADER : SIGNALING PROTEIN
COMPND : 2 MOLECULE: ADENYLYL CYCLASE-ASSOCIATED PROTEIN;
SOURCE : 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
AUTHOR : A.A.FEDOROV, T.DODATKO, D.A.ROSWARSKI, S.C.ALMO

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,.
seq	MPPRKELVGNKWFIENYENETESLVIDANKDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDGGNIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYVEFPISEQMKHSFADGKFKSAVFE
dssp	---EEEEE--EEEEEEE------EEEE-----EEEEEEEEEEEEEEE--E-EEEEEEEEEEEEEE--E---EEEEEEEEEEEEE-----EEEEE--EEEEEE---HHH--EEEEE--EEEEEEE--------E--E----EEEEEE--EEEEEE--
apssp	---HHHH----EEEEE-----EEEEEE----EEEEEEE---EEEEE---EEEEEE----EEEEEEE-EEEEEEEE----EEEEEE----EEEE------EEEE------EEEEE-----EEEEE--------------HHHHE------E-EEE--	-6.7	-9.1	-0.20
jpred	----------EEEEEE------EEEEE----EEEEEEE---EEEEEE--EEEEEE-----EEEEEEEEEEEEEEEE---EEEEEE----EEEEE-----EEEE------EEEEEE---EEEEEE---------------EEEEEE----EEEEE--	+0.1	-6.9	-0.13
phd	------E---EEEEE-----EEEEEEEE-----EEEEEEEEEEEEEE---EEEEE-----EEEEEE------EEEEE---EEEEE-----EEEE-----EEEEEE----EEEEEEEEEEE------------E-----HHHHHHE------EEEE-	-4.3	-4.8	-0.13
phdpsi	----------EEEEEEE----EEEEEEE----EEEEEE---EEEEEE---EEEEE----EEEEEEEEEEEEEEEEE---EEEEEE----EEEEE-----EEEEEE----EEEEEEE--EEEEE---------------HHHH-EE---EEEEEEE-	-5.3	-10.5	-0.18
profsec	-----EEE--EEEEEEE----EEEEEEE----EEEEEE---EEEEEEE-EEEEEE----EEEEEEEEEEEEEEEEE---EEEEEE----EEEEE-----EEEEEE----EEEEEEE--EEEEE--------EEE----HHHEEEE---EEEEEEE-	-5.2	-7.1	-0.20
psipred	----------EEEEEEE------EEEE-----EEEEE----EEEEEE--EEEEEE---EEEEEEEE--EEEEEEEEE--EEEEEE----EEEEE----EEEEE-HHH---EEEEE---EEEEEE--------------HHHHEEEE--EEEEEEE-	+1.5	-4.7	-0.09
samt99_sec	---HHHH---EEEEEEE-----EEEE------EEEEEE---EEEEEEEEE-EEEE----EEEEEEE-EEEEEEEE----EEEEEE----EEEEE-----EEEE------EEEEE----EEEEEE--------E-----HHHHEEE---EEEEEEEH	-3.7	-5.7	-0.16
sspro2	---HHHH---EEEEEEE-----EEEEE-----EEEEEEE--EEEEEEEEEEEEEE---EEEEEEEE-EEEEEEEEE---EEEEEE---EEEEEE-----EEEEE-----EEEEEE----EEEEE--------EE----HHHEEEE----EEEEE--	-4.0	-6.6	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva