EVA results for 1jmx:B

DATE : 2002_01_16
TYPE : sec
NRES : 339
HEADER : OXIDOREDUCTASE
COMPND : 2 MOLECULE: AMINE DEHYDROGENASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA;
AUTHOR : A.SATOH, I.MIYAHARA, K.HIROTSU

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....
seq	GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFATA
dssp	--------EEEEEEE---EEEEEE----EEEEEEE--------EEEE-----EEEEEE----EEEEEE----EEEEEEE------EEEE----EEE-----EEEEEEEEEEE----EEE---EEEEEEHHHHHHE---EEEE-------EEE-----EEEE---EEEE------EEEEE---------E---E------------EEEEEEEEEE----
apssp	--------EEEEEE-----EEEEEEE--EEEEEEE---------EHH-----EEEEEE-----EEEE--------EEE------------HHEEEE-----EEEEE----------EEE-----EEEEE---------------HHHHHHHH-----EEE-----EEEEE----EEEEE---------------EE----------HHHHHHHHHHHHH	-5.5	-1.8	-0.14
phd	--------EEEEEE-----EEEEEE----EEEEEEE-------EEEE-----EEEEE------EEEEE-------EE-------------EEEEEE-----EEEEEE---------EEE---EEEEEE-----------------HHHEEEEE----EEEE---EEEEE-E--EEEEEE--------------EEEEEE-----HHHHHHHHHHHHHHH	+0.1	+3.7	-0.04
phdpsi	----HHHHHHEEEE----EEEEEE-----EEEEEEEE------EEEE-----EEEEEE-----EEEEE-----EEEEEEE-------------EEE-----EEEEEE-----------------EEEEE----------------EEEEEEE----EEEEE---EEEEE-------------EE---E------EEEEE-----EEEEE---EEEEEE-	-4.6	-6.6	-0.17
prof_king	--EE----EEEEEEE----EEEEEE---EEEEEEEE-------EEEEE----EEEEEE----EEEEEE-----EEEEEEEEEEEEE----EEEEEEE----EEEEEE-------EEEE----EEEEEEE---EEEEE---------EEEEEE----EEEEE---EEEEEE---EEEEEEEE------------EEEEEE-------EEEEEEEHHH---	-3.1	+3.9	-0.16
profsec	----HHHHHEEEE-----EEEEEEE----EEEEEEE-------EEEE-----EEEEEE-----EEEEE-----EEEEEEE------------EEEE-----EEEEEE----------EE----EEEEEE----------------EEEEEEE----EEEEE---EEEEE------------EEEEEEEE----EEEEE------EEEE----EEEEEEE	-8.5	-3.3	-0.23
psipred	--------EEEEEE-----EEEEE----EEEEEEE--------EEEEE----EEEEEE-----EEEEE-HH--HHHHHEEEE---------EEEEEE----EEEEEE-----EEEEEEE---EEEEEE-----------------EEEEEE-----EEEEE---EEEEE-----EEEEEE-------------EEEE-------HHHHHHHHHHHHHHH	-9.1	-4.3	-0.19
sspro2	---HH---EEEEEE-----EEEEEEE---EEEEEE---------EEE-----EEEEEE-----EEEEE-HHHHHHHHH-H------------EEEE-----EEEEEE---------EEE----EEEEE-----------------EEEEEEE-----EEEE---EEEEE-----EEEE---HHHH--------EEEE--------HHHHHHHHHHHHHH	-10.6	-7.3	-0.18

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva