EVA results for 1jls:A

DATE : 2002_01_16
TYPE : sec
NRES : 219
HEADER : TRANSFERASE
COMPND : 2 MOLECULE: URACIL PHOSPHORIBOSYTRANSFERASE;
SOURCE : 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII;
AUTHOR : M.A.SCHUMACHER, C.J.BASHOR, K.OTSU, S.ZU, R.PARRY, B.ULLMAN,

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,...
seq	QEESILQDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDEPKLIYEKLPADIRERWVML
dssp	-HHHHHHHHHHH---EEE----HHHHHHHHHHH-----HHHHHHHHHHHHHHHHH-------EEEEEEE-----EEEEEEE---EEEEEE---HHHHHHHHHHH-----EEEEEEE----EEEEEE----HHH-EEEE
apssp	-HHHHHHHHHHH---EEE----HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH----E--EEEE-----EEEE--E---EEEEEEE-HHHHHHHHHHHH-----EEEEEEE----EEEEEE----HHH-EEEE	+19.4	+20.7	+0.42
jpred	-----HHHH------EEEE---HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-------EEEE-------EEEE----EEEEEEE----HHHHHHHHH------EEEEEE----EEEEE---------EEEE	+6.9	+18.3	+0.19
phd	---HHHHHHHH----EEEHHHHHHHHHHHHHHE-----HHHHHHHHHHHHHHHHHHHHHH--------E----EEEEEEEEEEEEEEEEEEE----HHHHHHHHHH-EEEEEEEEEE---HHHH----HHHHHHHHHE	-2.3	+2.7	0.00
phdpsi	-HHHHHHHHHHH---EEEE----HHHHHHHHEE------HHHHHHHHHHHHHHHHHHHH-------EEE-------EEEE----EEEEEE-----HHHHHHHHHH---EEEEEEEEE---EEEEE---------EEEE	+7.3	+20.1	+0.17
prof_king	-----HHHHHH----EEEE---HHHHHHEEEEEE-----HHHHHHHHHHHHHHHHHHH-----EEEEEEE----EEEEEE----EEEEEEE-----HHHHHHHH-----EEEEEEE----EEEEEE--------EEEE	+5.9	+20.0	+0.15
profsec	-HHHHHHHHHHH---EEEE---HHHHHHHHHEE-----HHHHHHHHHHHHHHHHHHHHH------EEEE------EEEEE----EEEEEEE----HHHHHHHHHH---EEEEEEEEE---EEEEEE--------EEEE	+7.8	+19.2	+0.17
psipred	---HHHHHHHHH---EEEE---HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH----EEEEEEE----EEEEEEE----EEEEEEE--HHHHHHHHHHH-----EEEEEEEE---EEEEEE--------EEEE	+13.2	+22.6	+0.29
sspro2	-HHHHHHHHHHH---EEEE---HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH-----EEEEEE-----EEE-E-----EEEEEEE---HHHHHHHHHH----EEEEEEEE----EEEEEE--------EEEE	+12.1	+15.1	+0.27

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Jan 16, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva