EVA results for 1thf:D

DATE : 2000_07_19
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,....6....,....7....,....8....,....9....,....10...,....11...,....12...,....13...,....14...,....15...,....16...,....17...,....18...,....19...,....20...,....21...,....22...,....23...,....24...,....25..
seq	MLAKRIIACLDVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVRLEGL
dssp	----EEEEEEEEE--EE--------------HHHHHHHHHH----EEEEEE------HHHHHHHHHHHHH------EEEE-----HHHHHHHHH----EEEE-HHHHH--HHHHHHHHHH-HHHEEEEEEEEEE--EEEEEE----EEEEEEHHHHHHHHHH----EEEEEE-----------HHHHHHHHHH----EEEE-----HHHHHHHHH----EEEE-HHHH-----HHHHHHHHHH----------
jpred	-----EEEEEE-----EEEE-----------HHHHHHHHHHH---EEEEEE---------HHHHHHHHHHHH---EEEE------HHHHHHHHHH---EEEE-------HHHHHHHHHH----EEEEEE--------EEEEEE-------HHHHHHHHHHHH----EEEEEE-----------HHHHHHHHH----EEEE------HHHHHHHHHH-HHHHHHHHHHH-----HHHHHHHHHH----------	+6	+16.8	+0.10
phd	---EEEEEEEE----EEEEEE----------HHHHHHHHHHH---EEEEEEE---------HHHHHHHHHHH--EEEEE-----HHHHHHHHHHH---EEEEE------HHHHHHHHHH----EEEEEEEE-----EEEEEEE--------HHHHHHHHHHH----EEEEEE-----------HHHHHHHHH----EEEE----HHHHHHHHHHH----EEEEEEEE---E--HHHHHHHHHH---EEEE---	+6.5	+14.2	+0.16
phdpsi	----E-EEEEE-----EEEE-----------HHHHHHHHHHH---EEEEEEE---------HHHHHHHHHH---EEEEE-----HHHHHHHHHHH---EEEEE------HHHHHHHHHH----EEEEEEEE------EEEEEE---------HHHHHHHHHH----EEEEEE-----------HHHHHHHHHH---EEEE-----HHHHHHHHHHH---EEEEEEE-------HHHHHHHHHH---EEEE---	+4.7	+11.8	+0.15
profsec	----EEEEEEE-----EEEEE-EEEE-----HHHHHHHHHH----EEEEEE---------HHHHHHHHHHHH---EEEEE-----HHHHHHHHHH---EEEEEE-----HHHHHHHHHH----EEEEEEEE------EEEEEE---------HHHHHHHHHH----EEEEEEE----------HHHHHHHHHH---EEEEE-----HHHHHHHHH----EEEEEEHHH-----HHHHHHHHHH---EEEE---	+4.6	+7.0	+0.14
psipred	----EEEEEEEEE--EEEE------------HHHHHHHHHH----EEEEE--HHH------HHHHHHHHHHH----EEE------HHHHHHHHH----EEEE--HHHH-HHHHHHHHHH-----EEEEEEEEEE---EEEEEE---------HHHHHHHHHH----EEEE----HHHH-----HHHHHHHHHH----EEEE-----HHHHHHHHH---HHHHHHHHHH-----HHHHHHHHHH---EEEE---	+6.8	+9.5	+0.13
pssp	-HHHHHHEEE-----EEEEE------------EEE-EE--EEE-EEEEEEE-HHHHHHHHHHHHHHHHHHH-EEE-EEE---EEE-HHHHHH-HH------EE-EE----HHHHHHHHHH---EEEEEE--------EEEEEE------EEEEHHHHHHHHHH----EEEEE------------EEEEEE------EEEEE-----HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH----EEEE---	-0.4	+2.7	-0.00
samt99_sec	----EEEEEEEE----EEEEE----------HHHHHHHHHHH---EEEEEE---------HHHHHHHHHHHH----EEEE-----HHHHHHHHHH---EEEEE------HHHHHHHHHHH---EEEEEE--------EEEEE----------HHHHHHHHHHH---EEEEE------------HHHHHHHHHHH---EEEE-----HHHHHHHHHH---EEEEEHHHH-----HHHHHHHHHHHHHHEE----	+5.9	+17.7	+0.16
sspro1	--HHHEEEEEE----EEEE------EEE---HHHHHHHHHH----EEEEEE----------HHHHHHHHHHH---EEEE------HHHHHHHHH----EEEEE------HHHHHHHHHHH---EEEEEEEEEE---EEEEEE----------HHHHHHHHHH----EEEEEE-----------HHHHHHHHHH----EEEE-----HHHHHHHHH----HHHHHHHH------HHHHHHHHHH---EEEE---	+6.2	+8.7	+0.12

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Oct 7, 2002
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva