| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3....,.... |
| seq | RXRFTIDQNXQFPLVEIDLEHGGSVYLQQGSXVYHTENV | | | |
| dssp | --EEEE--------EEEEE----EEEEE---EEEE---E | | | |
| apssp2 | ---EEEE-----EEEEEEE----EEEEE-----EE---E | +9.5 | +21.9 | +0.02 |
| phd | ---EEEE----EEEEEEEE----EEEEE--EEEEE--EE | +10.8 | +24.6 | +0.08 |
| phdpsi | ---EEEE----EEEEEEEE----EEEEE--EEEEE--EE | +9.2 | +23.3 | +0.06 |
| prof_king | --EEEEE----EEEEEEEE----EEEEE---EEEE---E | +16.7 | +24.5 | +0.29 |
| profsec | ---EEEEE---EEEEEEEE-----EEEE---EEEEE-EE | +1.9 | +8.4 | -0.1 |
| psipred | ---EEEEE----EEEEEEE----EEEE-----EEE---E | +6.5 | +19.2 | -0.04 |
| sable | ---EEEE-----EEEEEEE----EEEEE---EEE----E | +8.3 | +21.0 | +0.08 |
| samt99_sec | --EEEEE-----EEEEEEE----EEEEE--EEEEE---E | +14.5 | +26.7 | +0.26 |
| scratch | -EEEEEEE----EEEEEEE----EEEE---EEEEE---E | +6.2 | +16.7 | +0.02 |