| method | prediction | diff_Q3 | diff_sov | diff_info |
| | ....,....1....,....2....,....3...., |
| seq | EEACELPECQEDAGNKVCSLQCNNHACGWDGGDCS | | | |
| dssp | --------HHHH----------------HHHH--- | | | |
| phd | ----------------------------------- | +6.1 | -26.6 | -0.29 |
| phdpsi | ----------------------------------- | +4.3 | -28.3 | -0.32 |
| prof_king | ---------HHH----------------------- | +12.6 | +12.5 | +0.05 |
| profsec | ----------------------------------- | +2.0 | -31.6 | -0.35 |
| prospect | --------HHHHH---------------------- | +13.7 | +13.2 | -0.03 |
| psipred | -----HHHHHHH----------------------- | +4.5 | +4.6 | -0.23 |
| samt99_sec | ----HHHHHHHH----------------------- | +2.2 | +2.8 | -0.23 |
| scratch | ------HHHHH-----EE----------------- | -0.7 | -11.9 | -0.23 |