EVA results for 1p57:A

DATE : 2004_01_20
TYPE : sec

Results

method	prediction	diff_Q3	diff_sov	diff_info
	....,....1....,....2....,....3....,....4....,....5....,.
seq	PLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGAAGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLP
dssp	----EEE-----EEEEEE----EEEEEE----HHHHHHHHHHH-----EEEEEEEEHHHH-------EEEE----HHH---HHHHEEEE-----EEEEEEE---------
apssp2	-EEEEEE-----EEEEEE----EEEEEE------EEE---HHHHHHHHHH----EEEEEE------EEEEE------HHHHHHHHHHH-------EHHHHHHH-------	-14.9	-10.4	-0.18
jufo	----EE------EEEEEE----HHHHH--------------HHHHHHHHHH----EEHH--------EEEEE-----HHHHHHHHHH-------HHHHHHHH--------	-12.6	-8.8	-0.13
phd	---EEEEE---EEEEEE----EEEEEEEE----HHHHHHHHHH---------EEEEEEE------EEEEEEE-------HHHHH----------EEEEEE----------	+2.1	+11.3	+0.01
phdpsi	---EEEEE---EEEEEE----EEEEEEEE----HHHHHHHHHH---------EEEEEEE------EEEEEEE-------HHHHH----------EEEEEE----------	+0.7	+10.0	0.00
prof_king	-EEEEEE-----EEEEEEE----EEEEE----HHHHHH--HHH----------EEEEEEEEE----EEEEE-------HHHH-EEEEEE------EEEEEEE--------	0.0	+3.8	-0.01
profsec	---EEEE----EEEEEEE----EEEEEE-----HHHHHHHHHH---EEE----EEEEEEE-----EEEEEEE-------EEEEEEEEE------EEEE-EEHHH------	-2.2	+1.1	-0.04
prospect	----EE------EEEEEE----EEEE-------HHHH---HHHHHHHHHHH----------------EEEE------HHHHHHHHH---------EEE-HHHHH------	-8.3	-7.6	-0.06
psipred	--EEEEE-----EEEEEE-----EEEEEE----HHHHHHHHHHH-----------EEE---------EEEEE------EEEEEEE----------EEEEEE---------	-5.5	-0.6	-0.10
sable	---EEEE-----EEEEEE-----EEEEE------EEE----HHHHHHHHHH----EEEE-------EEEEEE-----HHHHHHHHHHH------HHHHHHHH--------	-18.1	-14.3	-0.17
samt99_sec	--EEEEE-----EEEEE------EEEEE------HHH---HHHHHHHHHHHHHH-------------EEEE-------HHHHHHHEEE-------EEEEEE---------	-6.2	-6.0	-0.04
yaspin	---EEEE-----EEEEEE-----EEEEE------EEE--------EEEEEE----EEEE--------EEEEE------HHHHHHHHHH-------EEEEEE--------	-3.6	-4.7	-0.10
scratch	----EEE-----EEEEE------HEEEE------EE----HHHHHHHHHHH-----	-18.4	-8.7	-0.17

Notations used

DATE : date when added [yyyy_mm_dd]
TYPE : prediction category
COMPND : from PDB:DSSP: compound
SOURCE : from PDB:DSSP: organism asf
AUTHOR : from PDB:DSSP: authors of PDB structure
method : name of prediction method
prediction: actual prediction
diff_Q3 : Q3(this protein) - Q3(average over all proteins)
with: three-state per-residue accuracy (percentage of correctly predicted residues)
diff_sov : Sov3(this protein) - Sov3(average over all proteins)
with: three-state per-segment accuracy (percentage of segment overlap)
diff_info : info(this protein) - info(average over all proteins)
with: info=(infoO + infoP)/2information index accuracy (percentage of observed)
and with: infoO=information index accuracy (percentage of observed)
and with: infoP=information index accuracy (percentage of predicted)

Last update: Apr 28, 2004
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva